Gene RPD_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3316 
Symbol 
ID4023826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3673654 
End bp3674547 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content67% 
IMG OID637963520 
Producthypothetical protein 
Protein accessionYP_570441 
Protein GI91977782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC ACCACAAGAC CTTCCTTGCG CCACCGTTCG TGGCGACGAT GGCGCTCGGC 
GCGTTGTGGC CGTCGCCGGG CTGGAACGCA AAGCACGGCT TTCCGGAGTT CAGCTTCATC
TGGCGCGACT ACCGGATCAG CAAGGATGCG CTCGGCGTGC TGCAGCGGCT CGCCGGCCGC
GACGACGACA CGACCACCGA TCGGCTGTTG CTGCTCGCGC CGCACGTCAC TGGCTTCCGC
CTGACGATGG CGATGCTGAT GCATCCGCAA TGGCCGCTAC CGATCTGGCG CGCGCTGCAG
TTGCGCAACC GGTTGATCCG CCGCGGCGAG ATCAAGGTCG CCTATCCGTC CGACCTGATC
GTGCGGGCGA TCGCCTGGCG CGTGCACGAC AAGGGCATCG AGCTCGACAT CCACGCGCAA
CTGCTGCAAG GCGACGATTG CCCGTGGGAG AGCATCACGA CTTTCTATTA CCGCGGCCGT
TTCCAGCCGC TGTTTTCGCG CGGCCCGGCC GAGGGCGCAT CGGCGATGTC CCCGGTTGTT
GATCCGACCC TCGCGCCGGT GGCGCGATGG ACCATCGATG GCGGCCGACG CCTGCGCTTC
GCGGGGCTGA CCGGCGATTA CAATCCATTG CATCTGCTGG ACGCTTACGC GCGACGAACC
GGGTTTGCTG CGGCGTCGGC GCATCCGCAG CGCATCGTCG CGCAATGCCT CGGTCACATC
CCCGATGCGG ACGCGCCGGC GCAGCAACTC GAACTATGGC TCAAGGGACC GGTGTATTTC
GGCCGCGACG TCACGCTGCG CGCGTACCGC TCGCCGCACG GCGACGACTT CGCGCTGTGG
CTCGACGGCG ATGAACGGCC GGCGCTGGTG GGAAGGCTAT CGAGCGCGAT CTGA
 
Protein sequence
MTTHHKTFLA PPFVATMALG ALWPSPGWNA KHGFPEFSFI WRDYRISKDA LGVLQRLAGR 
DDDTTTDRLL LLAPHVTGFR LTMAMLMHPQ WPLPIWRALQ LRNRLIRRGE IKVAYPSDLI
VRAIAWRVHD KGIELDIHAQ LLQGDDCPWE SITTFYYRGR FQPLFSRGPA EGASAMSPVV
DPTLAPVARW TIDGGRRLRF AGLTGDYNPL HLLDAYARRT GFAAASAHPQ RIVAQCLGHI
PDADAPAQQL ELWLKGPVYF GRDVTLRAYR SPHGDDFALW LDGDERPALV GRLSSAI