Gene RPD_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3313 
Symbol 
ID4023823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3670522 
End bp3670887 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content68% 
IMG OID637963517 
Producthypothetical protein 
Protein accessionYP_570438 
Protein GI91977779 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGG CGGCGATGTC GGACTGGACC ACGGGCGCGA ACGTCATCGT CTATCAGCGC 
TGCAACGCCT GCGGGGCGGC GCAGTATTTC CGCCGCGACT TCTGCGCCGC CTGCGGCGGT
GGCGATCTCG CCACGCTGCG GGCGAGTGGC GCGGGCACGG TTCATGCCGC GACGCTGGTG
TGCCGCGCCG CCACGCCGGA GGCGCGTGAG CACGTGCCCT TCAAGATCGT GCTGATCGAC
GCCGCCGAGG GTTTCCGCAT GATGGCGCAC GGCGCCAATG ATCTCGCCAT CGGCGACCCT
GTGCGCGCGC GGTTTGCACA CTTCACCGGT CGCCTCGTTC CGTATTTCGA AAGGACTGCC
TCATGA
 
Protein sequence
MSMAAMSDWT TGANVIVYQR CNACGAAQYF RRDFCAACGG GDLATLRASG AGTVHAATLV 
CRAATPEARE HVPFKIVLID AAEGFRMMAH GANDLAIGDP VRARFAHFTG RLVPYFERTA
S