| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3299 |
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| Symbol | |
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| ID | 4023809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3653594 |
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| End bp | 3654481 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963503 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_570424 |
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| Protein GI | 91977765 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.241837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0981124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAA TCGCATTCAT CGGTCTCGGC AATATGGGCG GCCCGATGGC CGCCAATCTG
GTCAAGGCCG GGCGGCACGT CACCGGCTTC GATCTCGCCG CGGCGTCGAT CGAGGCGGCC
AAGGCCGACG GCATTACGAT TGCGAAATCA GCGGTCGAAG CCGTGCAGGG CGCAGGCGTG
GTGGTCACCA TGCTGCCCGC CGGCAAGCAC GTGCTTGCGG TCTGGAACGA GATCCTTCCG
CACGTCGCCA AGGGCGCGCT GATCATCGAC TGCTCGACCA TCGACGTCGA AAGCGCGGTG
CAGGCTCATG CGCTGGCGGC GAAGTGCGGC GCCGCGTCGA TCGATGCGCC GGTCTCCGGC
GGCACCGGCG GCGCGAAAGC GGCGACGCTG ACCTTCATGG CCGGCGGCAG CGAGGCGGCG
TTCGCCGCGG CCAAGCCGGT GCTCGAACAA ATGGGCAAGA AGATCGTGCA TTGCGGCGGC
GCAGGCGCCG GGCAGGCGGC GAAGATCTGC AACAACATGA TCCTCGGCAT TTCGATGATC
GCCGTCAGCG AAGCATTCAC GCTGGCCGAA AAGCTCGGCC TGTCGCATCA GGCGTTGTTC
GACGTGGCGT CCACCTCGTC GGGTCAGTGC TGGTCGCTGA CCAGCTATTG CCCGGTGCCT
GGCCCGGTGC CGGCGTCGCC CGCCAACAAC GGTTACAAGC CGGGCTTCGC CGCGGCGTTG
ATGCTGAAGG ACCTGAAGCT GTCGCAGGAG GCGGCGAAGG CCTCCGGCGC CGCGACGCCG
CTCGGCGCAC ATGCCGCCGA AATTTACACG GCGTTCGAAC AGGCCGGCCA TGGCGGCGCT
GATTTTTCAG GAATCATCAA CCACCTGCGC GAGCAGGGAA CGAAGTAG
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| Protein sequence | MTAIAFIGLG NMGGPMAANL VKAGRHVTGF DLAAASIEAA KADGITIAKS AVEAVQGAGV
VVTMLPAGKH VLAVWNEILP HVAKGALIID CSTIDVESAV QAHALAAKCG AASIDAPVSG
GTGGAKAATL TFMAGGSEAA FAAAKPVLEQ MGKKIVHCGG AGAGQAAKIC NNMILGISMI
AVSEAFTLAE KLGLSHQALF DVASTSSGQC WSLTSYCPVP GPVPASPANN GYKPGFAAAL
MLKDLKLSQE AAKASGAATP LGAHAAEIYT AFEQAGHGGA DFSGIINHLR EQGTK
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