| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3298 |
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| Symbol | |
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| ID | 4023808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3651673 |
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| End bp | 3653394 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963502 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_570423 |
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| Protein GI | 91977764 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.373155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.115913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCT TCCAGCAAGC CCGTGCCTTT CTACTCGAAC ATCGGACCGA CTACGCCGCG
GCCGTCGCCG GCTTCCGCTG GCCGGATCCG GCGCCGTTCA ACTGGGCGCT CGACTGGTTC
GACGCCGAAC TCGCGACCAA CGCCGACAGC CGTGATCGCG CCGCGCTGTG GATCGTCGAC
GGCATCACCG GCGTCGAGCT CAAGCCGAGC TTTGCGACGA TGTCGAAGCG CTCCAATCAG
GTCGCGAACT ATCTGCGCGC GCAGGGCCTG AAACGCGGCG ATCATCTGCT GCTGCTGCTC
GGCAACGTCG TGCCGCTGTG GGAGACGATG CTGGCGGCGA TCAAGCTCGG AATCGTGGTG
ATCCCGGCGA CCACGCTGCT GACGCCCGAC GAATTACGCG ACCGGCTCGA CCGCGGCGCC
GCCAAGGCGG TGGTCGCGGC GCCAGATCAG GTGGCGAAAT TCGCCGATCT CGGCGGCGAT
AGCCTCATCC GCATCGTGGT CGGCAGCCCG CAGGACGGCT GGCGTGGTTA CGACGAGGCC
TCGCAGCAAT CCGACAGCTT CACGCCGGAT GGGCCGACCC AGGCCGACGA TCCGATGCTG
CTGTACTTCA CCTCCGGCAC GACGGCGAAG CCGAAGCTGG TGCGGCACAG TCAGCGCTCT
TATCCGGTCG GCGCGCTGTC GACGATGTTC TGGCTCGGTC TGCAGCCGGG CGACGTCCAT
CTCAACATTT CGTCGCCAGG CTGGGCCAAG CACGCCTGGA GCTGCTTCTT CGCGCCGTGG
AACGCCGGCG CCACCGTGTT CGTGGTCAAC CAGCCGCGGT TCGACGCCAA GAGCTTGCTC
GCGACCATCG GCCGCTGTGG CGTCACCACA CTGTGCGCGC CGCCCACGGT GTGGCGGATG
TTCATTCAGG AGAAGCTCGC CGACTACAAA GTGAGCCTGC GCGAAGTGTG CGGCGCCGGC
GAGCCGCTCA ATCCGGAAGT GATCGATCAG GTCAACGCGG CATGGGGCGC CACGATCCGC
GACGGCTACG GCCAGACCGA GACCACCGCG ATGGTCGGCA ATTCGCCCGG CCAGCCCGTG
AAGATCGGCT CGATGGGCCG GCCGCTGCCG GGCTACGTCG TCAGGATCAC CGACGCCGAC
GGCCATCCCG CGAAGGAAGG CGAGATCACG CTGGCGCTCG GCGATGCGCG CCCGGCCGGC
TTGATGCAGG GCTATCAGGG CGAAGGCGGC AAATTGTCGG GCGCCGAGGG CGATATCTAT
CGCAGCGGCG ACGTCGCATT CGCCGATGAC GACGGTTATC TCACCTTCGT CGGTCGGACC
GATGACGTCT TCAAATCGTC GGACTACCGG ATCAGCCCGT TCGAGCTGGA GAGCATCCTG
CTCGAACACG AGGCCGTCGC CGAAGCCGCT GTGGTCCCGA GCCCCGATGC GATCAAGCTG
GCGATTCCGA AAGCCTATGT GCTGCTCACG GCCGACGCCG AGCGCTCGCG CGACACGGCG
CTGTCGATCT TCCGCCACAT GCAGCAACGT CTGGCGCCGT TCAAGCGCAT CCGCAAGCTC
GAGTTGGTGA CCGAACTGCC GAAGACGATC TCCGGCAAGA TCCGCCGCGT GCATCTGCGT
CGCCTCGAAC ACGACGACGA CCGCGCCGAC ACCCTGCGTG GCGTCGAGTA TCGCGAAGAG
GATTTTCCGG AGTTGAAAGC CGCGCCTGCG AAGGAGGGGT GA
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| Protein sequence | MTTFQQARAF LLEHRTDYAA AVAGFRWPDP APFNWALDWF DAELATNADS RDRAALWIVD
GITGVELKPS FATMSKRSNQ VANYLRAQGL KRGDHLLLLL GNVVPLWETM LAAIKLGIVV
IPATTLLTPD ELRDRLDRGA AKAVVAAPDQ VAKFADLGGD SLIRIVVGSP QDGWRGYDEA
SQQSDSFTPD GPTQADDPML LYFTSGTTAK PKLVRHSQRS YPVGALSTMF WLGLQPGDVH
LNISSPGWAK HAWSCFFAPW NAGATVFVVN QPRFDAKSLL ATIGRCGVTT LCAPPTVWRM
FIQEKLADYK VSLREVCGAG EPLNPEVIDQ VNAAWGATIR DGYGQTETTA MVGNSPGQPV
KIGSMGRPLP GYVVRITDAD GHPAKEGEIT LALGDARPAG LMQGYQGEGG KLSGAEGDIY
RSGDVAFADD DGYLTFVGRT DDVFKSSDYR ISPFELESIL LEHEAVAEAA VVPSPDAIKL
AIPKAYVLLT ADAERSRDTA LSIFRHMQQR LAPFKRIRKL ELVTELPKTI SGKIRRVHLR
RLEHDDDRAD TLRGVEYREE DFPELKAAPA KEG
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