Gene RPD_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3297 
Symbol 
ID4023807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3650608 
End bp3651498 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content66% 
IMG OID637963501 
Productenoyl-CoA hydratase 
Protein accessionYP_570422 
Protein GI91977763 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.571809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0468568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCG AGACGATCAA ATACGAGGTC GCCGACCAGA TCCTGACCAT CACGCTGAAC 
CGGCCCGAGA AGCTGAACGC GTTCAACGCC GCGATGCAGA CCGAGCTGAT CGAGGCGTTC
GACAAGGCCG ACGCCGACGA CGACATTCGC GCCATCATCG TCACCGGCGA AGGCCGCGCG
TTCTGCGCCG GCGCGGATCT CTCCTCGGGC GCCGACACTT TCGATCGCGA CGCGCGCCGC
GGTCCGGTGA AGCGTCATGC CGACGGCGCC GCCGACTATA GCGACCCGCA GGTGCGCGAC
GGCGGCGGCC AGGTGACGCT GCGCATCTTC AAATGCCTGA AGCCGGTGAT CGCGGCCGTG
AACGGCCCCG CGGTCGGCAT CGGCGTCACC ATGCAACTCG CGATGGACAT CCGCATCGCC
TCGGAGGCTG CGCGGTTCGG CTTCGTGTTC TCACAGCGCG GCATCGTCCC GGAAGCGGCG
TCGAGCTGGT TCCTGCCGCG CATCGTCGGC ATCAGCCAAG CCTTGGAGTG GTGCTACACC
GGCCGCGTCT TCCCGGCGCA GGAAGCGCTC GCAGGCAAAC TCGTCAGCCG CGTCGTGCCC
GCCGATCAGT TGCTGGAGAC CGCCCGTACG CTCGCGAAGG AAATCGCCGC GAAGACCGCG
CCGGTCTCAG TCGCGCTGAT ACGGCAGATG ATGTGGCGGA TGCTCGGGGC CGACGATCCG
ATGGAAGCGC ACAAGATCGA CAGCCGCGGC ATCTACGAGC GCGGCCGCTC CGACGACGTC
AAGGAAGGCG TCACCTCGTT CCTGGAAAAA CGCCCGGCGC AATTCAAGAA CAAGGTCTCT
GCCGACATGC CCGCATATTT CCCGTGGTGG GACGAGCGGG AGTATAAGTA A
 
Protein sequence
MTFETIKYEV ADQILTITLN RPEKLNAFNA AMQTELIEAF DKADADDDIR AIIVTGEGRA 
FCAGADLSSG ADTFDRDARR GPVKRHADGA ADYSDPQVRD GGGQVTLRIF KCLKPVIAAV
NGPAVGIGVT MQLAMDIRIA SEAARFGFVF SQRGIVPEAA SSWFLPRIVG ISQALEWCYT
GRVFPAQEAL AGKLVSRVVP ADQLLETART LAKEIAAKTA PVSVALIRQM MWRMLGADDP
MEAHKIDSRG IYERGRSDDV KEGVTSFLEK RPAQFKNKVS ADMPAYFPWW DEREYK