| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3295 |
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| Symbol | |
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| ID | 4023805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3647834 |
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| End bp | 3649009 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963499 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_570420 |
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| Protein GI | 91977761 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.353614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0242454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGA TCGACCGCAT CGATGCCTTC GCCGACGAAC TGACCGCGAT CCGCCGCGAT
CTGCATATGC ATCCGGAGAT CGGCTTCGAG GAGGTCCGCA CCTCCAACAT GGTCGCCGAG
AAGCTCGACG AATGGGGCAT CGAGGTGCAT CGCGGGCTCG GCGGCACCGG CGTGGTCGGC
GTGCTCAAGG GCAAGGGCAA TAGCGGCCGC CGGATCGGCC TGCGCGCCGA CATGGACGCG
CTGCCGATGG AGGAGCACAC CAACCTGCCG TGGCGCTCGA CCATCCCCGG CCGCTTCCAC
GGCTGTGGCC ATGACGGCCA CACCACGATG TTGTTGGGAA CCGCGCGGTA TCTCGCCGAG
ACCCGGAATT TCGACGGCAC GGTGCATTTC ATCTTCCAAC CGGCCGAAGA AGGGCTCGGC
GGCGCGCGCG CGATGATCAA GGACGGGCTG TTCCAGAAAT TTCCGTGTGA CGAACTCTAC
GGCCTGCACA ACGCGCCCGA TCTGGCGCAT GGCGAGGTCG CGATCCTGCC CGGACCGGCG
ATGGCGGGCG CCGACTTTTT CGACATCACC ATCTCGGGCT ACGGCGCGCA TGGCGCGATG
CCGGAGCGCT CCAAGGACCC GGTGGTGATC GCGATGACGC TCGGCCAGGC GCTGCAGACC
ATCGTCAGCC GCAACGTCGA TCCGCTGCAC TCGGCGGTGC TGTCGATCAC CCAGATTCAT
TCCGGCTCGG CCTACAATGT GATTCCCGGC GAAGCGCGGC TCGCCGGCAC CGTCCGTGCG
TTCTCCGACG ACATCCGCAA GCTGGTGCGC GAGCGAATGC GCGCGCTCGC CGCCGGCATC
GCAGCGGCGT TCGACGTCGA GATCAGCGTC GACATCCGCG ACATCTTCAG CGTGCTGGTG
AACCAGCAGG AGCAGAGCGA CGTGGTCGCT GCGGTCGCGC GCGGCGTGGT CGGCGACGCC
AACGTCAAGC TGCGCGAGCA GCCGAAAATG GGTAGCGAGG ATTTCGCCGA CATGCTGCAG
ACGATCCCCG GCGCGTATTT CTGGATCGGC CATGACGGCG ACGTACCGGT GCACAATCCC
GGCTACGTGC TCGACGACAA AATTCTGCCG ATCGGCGCCA GCATGTTCGC GCGCATCATC
GAAACCCGGC TGCCGGCGGG CGCCTCACAT GTCTGA
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| Protein sequence | MPTIDRIDAF ADELTAIRRD LHMHPEIGFE EVRTSNMVAE KLDEWGIEVH RGLGGTGVVG
VLKGKGNSGR RIGLRADMDA LPMEEHTNLP WRSTIPGRFH GCGHDGHTTM LLGTARYLAE
TRNFDGTVHF IFQPAEEGLG GARAMIKDGL FQKFPCDELY GLHNAPDLAH GEVAILPGPA
MAGADFFDIT ISGYGAHGAM PERSKDPVVI AMTLGQALQT IVSRNVDPLH SAVLSITQIH
SGSAYNVIPG EARLAGTVRA FSDDIRKLVR ERMRALAAGI AAAFDVEISV DIRDIFSVLV
NQQEQSDVVA AVARGVVGDA NVKLREQPKM GSEDFADMLQ TIPGAYFWIG HDGDVPVHNP
GYVLDDKILP IGASMFARII ETRLPAGASH V
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