Gene RPD_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3288 
Symbol 
ID4023797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3640585 
End bp3641445 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content64% 
IMG OID637963491 
Productserine O-acetyltransferase 
Protein accessionYP_570413 
Protein GI91977754 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0284698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGA CAGACGAGAT CGAGAGAGCC GGCATGGTGA TGCATCAGGT CAATCCGCAA 
CCCGCGAAAC TGACGGCGCT CGATCCGATC TGGGAACGGG TGCGCAACGA AGCGGAAGAC
GTCGTCCGCC GCGAGCCCGA ACTCGCATCC TTCATCTACG CCAGCGTGCT GCATCACGAC
CGGCTCGAAG ACGCGGTGGT GCATCGGGTC GCCGAACGGC TCGATCACGC GGCTTTGTCC
GGCGATCTGA TCCGCCAGAC TTTCGAGGAA GCCCTGCGCG AGCAGCCCGA TATCGGCAAT
GCGTTCCGTG CCGACCTGGT CGCGATCTTC GATCGCGATC CGGCGACATC CCGGTTCATC
GACCCGCTGC TGTACTTCAA AGGCTTCCAC GCGATCCAGA CGCATCGGCT TGCGAACTGG
CTGCATCTCA AGGGTCGCAA GGATTTCGCT CTGTATCTGC AGAGCCGCGC ATCGGCGGTG
TTTCAGACCG ACATCAATCC CGCCGCCCGG ATCGGCCGCG GGATTTTCCT CGATCATGCG
ACCGGCCTCG TCGTTGGCGA AACCGCGGTG ATCGAAGACG ATGTTTCGAT CCTGCACGGC
GTGACGCTCG GCGGCACCGG CAAGGAGCAC GAGGATCGTC ACCCGAAGAT TCGCCACGGC
GTGATGATCG GCGCCGGCGC GAAGATTCTT GGCAATATCG AGGTCGGGCA TTGCGCGCGC
GTCGCCGCCG GGTCGGTTGT GCTGAAGGAT GTGCCGCACA ACATGACGGT CGCCGGCGTG
CCGGCGAAGG TGGTGGGCGA GGCGGGCTGC GCCGAGCCGT CGCGCACCAT GGATCAGATG
CTCAACGCCA TCGGGATATG A
 
Protein sequence
MNATDEIERA GMVMHQVNPQ PAKLTALDPI WERVRNEAED VVRREPELAS FIYASVLHHD 
RLEDAVVHRV AERLDHAALS GDLIRQTFEE ALREQPDIGN AFRADLVAIF DRDPATSRFI
DPLLYFKGFH AIQTHRLANW LHLKGRKDFA LYLQSRASAV FQTDINPAAR IGRGIFLDHA
TGLVVGETAV IEDDVSILHG VTLGGTGKEH EDRHPKIRHG VMIGAGAKIL GNIEVGHCAR
VAAGSVVLKD VPHNMTVAGV PAKVVGEAGC AEPSRTMDQM LNAIGI