Gene RPD_3284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3284 
Symbol 
ID4023793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3638269 
End bp3638799 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content67% 
IMG OID637963487 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_570409 
Protein GI91977750 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.619416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0269804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCT ACGAGCTCGA CGGGCAGCGC CCTGATCTTC CGCAGGATGG AAACTACTTC 
ATCGCCGAAA CCGCGACGGT GATCGGCAAG GTTCGCTTGA AGCCGTCCGC CACCGTATGG
TTCGGCGCGG TGCTGCGCGG CGACAACGAG TGGATCGAGA TCGGCGAGGG CTCCAACGTG
CAGGACGGCT CGACCTGCCA CACCGACCCG GGATTCCCGC TCACCGTCGG CAAGAACTGC
ACGATCGGCC ACAACGTCAT CCTGCACGGC TGCACCATCG AGGACGGCGT CCTGATCGGC
ATGGGTGCGA TCGTGATGAA CGGCGCGCGG ATCGGCCGCG GCTCGATCGT CGGCGCCGGC
GCGATCGTGA CCGAGGGCAA ACAGTTTCCG GAGAATTCGC TGATCATCGG CGCGCCGGCC
AAGGTGGCGC GCGCGCTCGA TTCGGCGCAG GCGGCGGCGA TGGAGCGGCC TGCGATGTTC
TACGCGGCCA ACGGCCCGCG CTACGCCAAG GGCCTCAAGA AGATCGGCTG A
 
Protein sequence
MAIYELDGQR PDLPQDGNYF IAETATVIGK VRLKPSATVW FGAVLRGDNE WIEIGEGSNV 
QDGSTCHTDP GFPLTVGKNC TIGHNVILHG CTIEDGVLIG MGAIVMNGAR IGRGSIVGAG
AIVTEGKQFP ENSLIIGAPA KVARALDSAQ AAAMERPAMF YAANGPRYAK GLKKIG