Gene RPD_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3253 
Symbol 
ID4023762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3607684 
End bp3608535 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID637963456 
Producthypothetical protein 
Protein accessionYP_570378 
Protein GI91977719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.517668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG TCTCAGTTGA TCGCGCGGCT GCGCCGCAGG GGCGCGGCTG GCAAAGCGGC 
GCGGGCGACC TATATCGCCA TTATCGATCC TCTTTCTCCT TTATCCGTAT CATTGTGAGA
CGCCTGGTGA TCCTGCTGCT GTTTCTGCTC GTCGTGCCGA TCGTCGCGTC GGCCGCCAAA
TACATGCTGG GCGATCGCAG CGTGGCGTGG CACTCCGCGG ACCGCTCCAG CGCCGGCCTG
CTGCCGCCGG CGGCTGCCCA TCCCGAGCCG CTGGTGCGGG TGTTCGCCGC GCGCACCGTG
AGCTGGCGCG GGATTTTCGC TGTGCATAGC TGGATCGTGG TCAAGCCCGC CAATGCGACG
CGCTACACCC GCTACGACTA CACCGCGTGG GGCGATCCGA TCCGCGTCAA CGGCTTCGCC
GCCGATGGCC GCTGGTTCGG CGACGTACCG CAAGTGATCG CCGCCGCCGA TGGCGAACAG
GCGGCTGTGA TGATTCCGAA GATCGAGGCC GCGATCAAAA GCTACAAGCT CAATGCCTAT
GGCGACTATC GCGCCTGGCC GGGGCCGAAC TCCAACACCT TCGTCGCCGC AGCGCTCGCC
GCGGTTCCGG AACTGCGCAC CACGCTGCCG CCGACCGCGA TCGGCAAGGA CTATCCGTGG
GACGGCGGCT GGATCGGCTG GACGCCGTCC GGCACCGGAA TCCGCGCCAC GCTCGGCGGT
TATCTCGGCC TCACGCTGGG CTGGATCGAA GGCGTCGAGG TGAACCTGTT CGGCGCCGTG
CTCGGCCTCG ATCTGCGCCG CCCAGCGATC AAGCTCCCCG GCCTCGGCCG CATCGGCCTC
AGTCCGATCT AG
 
Protein sequence
MIVVSVDRAA APQGRGWQSG AGDLYRHYRS SFSFIRIIVR RLVILLLFLL VVPIVASAAK 
YMLGDRSVAW HSADRSSAGL LPPAAAHPEP LVRVFAARTV SWRGIFAVHS WIVVKPANAT
RYTRYDYTAW GDPIRVNGFA ADGRWFGDVP QVIAAADGEQ AAVMIPKIEA AIKSYKLNAY
GDYRAWPGPN SNTFVAAALA AVPELRTTLP PTAIGKDYPW DGGWIGWTPS GTGIRATLGG
YLGLTLGWIE GVEVNLFGAV LGLDLRRPAI KLPGLGRIGL SPI