Gene RPD_3251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3251 
Symbol 
ID4023760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3605698 
End bp3606108 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content70% 
IMG OID637963454 
Producthypothetical protein 
Protein accessionYP_570376 
Protein GI91977717 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.455844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGTCC CAGCGCGCGT GAAACTGCCC TCCTCCCCCA CCGAACTACT CCATGTGATC 
AAGCGCGCCC CGCGCAACGC CGGGCGCGGA CTGATCTGGC TCTATCGCCA CACGCTGTCG
CCGCTGGTCG GCTATCATTG CCGGCATCTG CCGACCTGCT CGGTTTACGG CGACGAGGCG
ATCGGACGGT TCGGACTCTG GGCCGGCGGC TGGATGACGC TGGCGCGACT GCTGCGCTGC
AATCCTTACG GCACCTCGGG GATCGACAAC GTCCCAGCCG CCGCCCCGCC CGGCGCGCAC
TGGTACCTGC CCTGGCGCTA CGCGCGCTGG CGCGGGGTGA ATGCGCCGGC GGCGGAGCAC
GCGCCATGTG GTTGCGGGTG CAGCGGCAAG GGCAACGTCG CCCCGGACTG A
 
Protein sequence
MKVPARVKLP SSPTELLHVI KRAPRNAGRG LIWLYRHTLS PLVGYHCRHL PTCSVYGDEA 
IGRFGLWAGG WMTLARLLRC NPYGTSGIDN VPAAAPPGAH WYLPWRYARW RGVNAPAAEH
APCGCGCSGK GNVAPD