| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3243 |
|---|
| Symbol | |
|---|
| ID | 4023752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3598860 |
|---|
| End bp | 3600041 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637963447 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_570369 |
|---|
| Protein GI | 91977710 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5330] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.399185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.111483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATGA TTGTTCGGCA GTTCATCAGT TGGATCCGTC ACGCGCCCGC GGGCGAGCGC
GCTGAAGCCA CCCGGGCGCT GGCGCGGGCC TGGCTGATCT CCGATCTTTC GCCCGAGGAT
CGCTCCGCCG CCGAAGGCGC GCTGCTGATG ATGCTGGATG ACGTTTCGCC GCTGGTGCGC
CAGGCGATGG CGCAGGTGTT TTCGCGCAGC GCGCGCGCCC CCGCCGCGAT CGTTCGTGCG
CTCGCCGCCG ATCAGCCCTC GGTGGCGCTG CCGGTGCTTG AATTCTCGCC GCTGCTGATC
GACGCCGATC TGGTCGACAT CGTCGCCACC GGCGACGACG CGGTGCAATG CGCGATCGCG
CGGCGGGTGC GGCTGCCCGC GGCGGTGTGC GCTGCGATCG CCGAGGTCGG CTCGCCGGCC
GCGGCGCTGG AACTGATCGA AAATCCCCGC GCCGAACTCG CGCCGTTCTC GTGGGACCGT
ATCGTCGAGC GCCACGGCCA TCTCGCCGCG ATCCGCGAGT CGATGTTGGT GCTGGAGGAT
CTGCCGGCGG CGACGCGGCT GGCGCTGATC GCCAAGCTCT CCGAGACGCT GCAGCAATTC
GTGGTGGCGC GGCGCTGGCT GTCGGCGGAT CGCGCCGCGC GCGCGGTGGG CGAGGCGCTG
GATCGCTCGA CCGTGACGGT CGCGGCGCGC TCGCGCGGCG ACGACATGCG CGCGCTGATG
CAGCATCTGC GCGCCACCTC GCAGCTCACC GCCGGGCTGA TCCTGCGCGC GCTGCTGTCC
GGCAATCGCG AATTGTTCGA ATACGCGCTG GTCGAACTGT CCGGCCTGCC GCAGGCGCGG
GTGGCGTCGC TGCTGCACGA ATGCGGCGGC CCGAGCCTGA ATGCGCTGCT GGCGCGCGCC
GGCCTGCCGC AGTCGACCTT CGCCGCGTTC CGCGCCGCGC TGGAGGCGCA GCACGAGATC
GGCTTCGTCG GCAGCGAGGG CGGCGCGGTG CGGCTGCGCC GGCTGATGGT CGAGCGGGTG
CTGACGCGCT GCGAGACCGG CGCCGACGCG GCGGCGCCGC TGCTGATCCT GCTGCGCCGC
TTCGCCACCG AATCGGCCCG CGAGGAAGCC AGCGCGTTCT GCGGCGAACT GATCGCCGAG
CACGACGAGC GCGCCTGGCA GGACGAGCCG ATCGCCGCGT AG
|
|---|
| Protein sequence | MPMIVRQFIS WIRHAPAGER AEATRALARA WLISDLSPED RSAAEGALLM MLDDVSPLVR
QAMAQVFSRS ARAPAAIVRA LAADQPSVAL PVLEFSPLLI DADLVDIVAT GDDAVQCAIA
RRVRLPAAVC AAIAEVGSPA AALELIENPR AELAPFSWDR IVERHGHLAA IRESMLVLED
LPAATRLALI AKLSETLQQF VVARRWLSAD RAARAVGEAL DRSTVTVAAR SRGDDMRALM
QHLRATSQLT AGLILRALLS GNRELFEYAL VELSGLPQAR VASLLHECGG PSLNALLARA
GLPQSTFAAF RAALEAQHEI GFVGSEGGAV RLRRLMVERV LTRCETGADA AAPLLILLRR
FATESAREEA SAFCGELIAE HDERAWQDEP IAA
|
|---|
| |