| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3236 |
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| Symbol | |
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| ID | 4023745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3591103 |
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| End bp | 3591639 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963440 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_570362 |
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| Protein GI | 91977703 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.076369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAG GACTGCGACT ATTCGCCTTC GCCCTGATCT CGGCCGCGCT GGTCGCGCCG
CCGGCGATGA CGCCCGCGCG CGCCGCGCCC GACTCCCAAC CGTCGCCGCC GCCGTCGTCG
GACAGCAAAT CGAGCGGCGG CAAGAAGAAG GACGACAGGC GCTCCGAGCA GCAATTCCGC
GACGGTTATC GCACCGCCTA TGCGACCATC TACGAGCGCC ACGACTACGC GGCCGCGATC
GACCAGCTCA AGGCGCTCGG CCGCGACGAC AACGCGTCGG TGGCGACGCT GATCGGCTAT
TCCTATCGCA AGCTCGGCGA CGCCAAGCTG GCGCAGGCGT ATTACGAGCG CGCACTGAAG
ACCGATCCGA ACCACGTCAG GACCTGGCAG TATTACGGCC TGTGGCAGGT CGAACAGGGC
CATCGCGAGC GCGCGCAAGT TCACCTCGAC CGCATCGCCG CGCTGTGCGG AACATCGTGC
GAGGAATACA AATCGCTGGC GGACGCGATC GGCAGCGGCG CCGGCGGATC GTACTGA
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| Protein sequence | MTRGLRLFAF ALISAALVAP PAMTPARAAP DSQPSPPPSS DSKSSGGKKK DDRRSEQQFR
DGYRTAYATI YERHDYAAAI DQLKALGRDD NASVATLIGY SYRKLGDAKL AQAYYERALK
TDPNHVRTWQ YYGLWQVEQG HRERAQVHLD RIAALCGTSC EEYKSLADAI GSGAGGSY
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