| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3227 |
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| Symbol | |
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| ID | 4023734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3581450 |
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| End bp | 3583438 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637963429 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_570353 |
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| Protein GI | 91977694 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.545837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGC CTGAGTCCCC GGCGCCGCAT CCCGGCTCGG CGGTGGCGGG CTCGCAGTTC
GGCCTGCCGG ACGCCGGGAC GCTCTCGCCT CCCGCGACTG CCGCTCCGCT CGCGCCGGAT
GTCGCCGTGA TCGCGCAACT CGCCAATGCG TTCTTTGCGG CTTTGCCGAA CGGCCCGGCG
CCGGAGCCGG GCGCGGCGCT CGGCTCGGCG CCGCTGTTCG TGGCCGAACC GTTGCAAAAC
GCCATTCCGG GCACGCCGGC GCTGACGCCG TCCTACAAGC CGAACCACAA TCCCGGCGCG
GCCTCGCCGA TTCCCACGGT CGGCGCGGCG CGCCCCTCTG CGCCGATCTT CGCGCTCGAC
CCCGGGTTGA CGCCGGAGCC CGCTGCGGCC CGCGCGCCTG CTCAGCCGCA GGGTCTGACC
GTGCCGCTGG TGACGACTCC GGTCGCGCCG CCGGCGCAGC CATCGCCGCC GTCGGCGCCG
TCATTTACGC GTGACACCGA CCTTGCGGCC TTGCCCGGCC GGCTCGATGA CACGCGCAGC
CTGGCGCCGC GCTACGACGC GCCAAACGCC GGACCGTTCG GCGGCAGCTT CGCCGGCGCG
TCGGAGCCGC TGTATTTTCT TGCCGGCAAT CCGGCGCTGG CGCGCGCGAC GCCGGCCGTG
GCGCCGCCAT CGCCGCCGCG CGTGGAGACC CTCGATCTCG GCGCGTTGGC TGCGCAGCAT
CGCACCGACG TCGCCGTCGG CGATCTGCCC GGCCTGCGCG CGTTCGACGC TAATCTGTTT
CGTCGCGATT TCCCGATCCT GCGGGAAACC GTCAACGGCC GGCCGCTGAT CTGGCTCGAC
AACGGCGCGA CGACGCAGAA GCCGCAATGC GTGATCGATC GCCTTGCGTA TTTCTACGCC
CACGAAAATT CCAACATCCA TCGCGCTGCG CATACGCTCG CGGCGCGTTC CACCGACGCC
TATGAGGCGG CGCGCGACAA GGTCCGCGCC TTCATCAACG CGCCGCAGGT CGCCGACATC
GTGTTCGTGC GCGGCGCCAC CGAGGCGATC AATCTGGTTG CTCAGGCCTG GGGCCGGCGC
AATGTCAGTG AGGGCGACGA GATCGTCGTC AGCCATCTCG AGCACCACGC CAATATCGTG
CCGTGGCAGC AGCTCGCGGC CGAGAAGGGC GCGCGGCTGC GCGTCGCCCC GGTCGACGAT
CACGGCCAGA TCATCCTTGA AGAGTACGAG AAGCTTCTCA ATCCGCGCAC CCGCATCGTC
GCCTTCACGC AAGTATCGAA TGCGCTCGGC ACGGTGACGC CGGTCGCCGA GATGACGGCG
CTGGCGCATC GCCACGGCGC CAAGGTGCTG GTCGACGGCG CCCAGGGCGT CTGTCATATG
CCGGTCGACG TGCAGGCGCT GGACGTCGAT TTCTACGCCT TCTCCGGCCA CAAGATGTTC
GCGCCGACCG GCATCGGCGT GCTGTACGGC AAGGCCGATG TGCTGGAAGC GATGCCGCCG
TGGCAGGGCG GCGGCAATAT GATCGCCGAC GTCACCTTCG AGAAGACGGT GTTTCAAGGG
GCCCCGGACC GGTTCGAGGC CGGCACCGGC AACATCGCCG ACGCCGTCGG CCTCGGCGCC
GCGATCGACT ATCTCAGCCG CATCGGCATG GCGAACATCG CCGCGCATGA GCACGAGCTG
CTGGCCTACG GCACCCAGGC GCTGCTCGCC GTGCCGGGCC TGAAGCTGAT CGGCACCGCG
CGCGAGAAAG CCGGCATCCT GTCATTCGTG CTCGATGGCT GCCGCAGTGA AGATGTCGGC
CGTGCGCTCG ATCGCGAAGG CATCGCGGTG CGGGCCGGGC ATCATTGCGC CCAGCCGATC
CTGCGCCGGT TCGGCCTCGA GAGCACGGTG CGGCCTTCGC TCGCGCTCTA CAACACCACC
GCGGACATCG ATGCTCTGGT CGATGCGCTG AAGCGTCTGC AGAGCGGTCG GGGCGTTCAC
TGGAGCTGA
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| Protein sequence | MSAPESPAPH PGSAVAGSQF GLPDAGTLSP PATAAPLAPD VAVIAQLANA FFAALPNGPA
PEPGAALGSA PLFVAEPLQN AIPGTPALTP SYKPNHNPGA ASPIPTVGAA RPSAPIFALD
PGLTPEPAAA RAPAQPQGLT VPLVTTPVAP PAQPSPPSAP SFTRDTDLAA LPGRLDDTRS
LAPRYDAPNA GPFGGSFAGA SEPLYFLAGN PALARATPAV APPSPPRVET LDLGALAAQH
RTDVAVGDLP GLRAFDANLF RRDFPILRET VNGRPLIWLD NGATTQKPQC VIDRLAYFYA
HENSNIHRAA HTLAARSTDA YEAARDKVRA FINAPQVADI VFVRGATEAI NLVAQAWGRR
NVSEGDEIVV SHLEHHANIV PWQQLAAEKG ARLRVAPVDD HGQIILEEYE KLLNPRTRIV
AFTQVSNALG TVTPVAEMTA LAHRHGAKVL VDGAQGVCHM PVDVQALDVD FYAFSGHKMF
APTGIGVLYG KADVLEAMPP WQGGGNMIAD VTFEKTVFQG APDRFEAGTG NIADAVGLGA
AIDYLSRIGM ANIAAHEHEL LAYGTQALLA VPGLKLIGTA REKAGILSFV LDGCRSEDVG
RALDREGIAV RAGHHCAQPI LRRFGLESTV RPSLALYNTT ADIDALVDAL KRLQSGRGVH
WS
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