| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3221 |
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| Symbol | |
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| ID | 4023728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3575248 |
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| End bp | 3576030 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637963423 |
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| Product | NLPA lipoprotein |
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| Protein accession | YP_570347 |
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| Protein GI | 91977688 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.219486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACGGA AGTTTTTCGC CGCCACGGCG CTCGCCGCGC TGTTGGCATG GACGCCTGCC
TGGAGCGCCG AGGTGATCCG GATCGGCACC ACCGCAGGCC CCTACGCCGA AATCCTGCGC
TACGCCGGCG ACCTCGCCGC CAAGCAGGGG ATCGAGCTGA AGATCACCGA ATTCACCGAC
TACACGGTGC CGAACGCGGC GCTGGCGCAG GACGATCTCG ACATCAACAA TTTCCAGCAC
CAGCCCTATC TCGACAACCA GGTCGCGCAA CGCGGCTACG ACATCGTCTC GATCGCCAAG
AGCATCATCG TTCCGATCGG GCTGTATTCG AACAAGCTGA AAAGCTTCAG CGAGCTCAAG
AACGGCGCCA CCGCCGCAAT TCCCAACGAT CCGTCGAACG GCGCCCGCGC CCTGCAGCTG
TTCGAGAAGG CCGGCCTGAT CAAGCTGAAG CCGGGCATCG GCATCAAGGC GACCCCGGCC
AACATCGCCG AGAATCCGAA GAACCTCAAG ATCGTCGAGC TCGACGCGGC GCAACTGCCG
CGCTCGCTGA ACGATCTCGA TTTTTCGGCG GTGAACCTCA ACTACGCGCT CAGCGCCGGG
CTCGATCCGA AAAAGGCGCT GCTGCTGGAG GACGCCGACA CCAAATGGAA TCTGGTGTTC
GCGGTGCGCG CCAAGAACAA GGACAACCCG ACGCTGAAGA AGTTCGTCGA AATCTATCGC
TCGCCCGAGG TGAAGGCCTT CACCGACAAG CGCTTCGACG GCACCATCCT CACCACCTGG
TAA
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| Protein sequence | MTRKFFAATA LAALLAWTPA WSAEVIRIGT TAGPYAEILR YAGDLAAKQG IELKITEFTD
YTVPNAALAQ DDLDINNFQH QPYLDNQVAQ RGYDIVSIAK SIIVPIGLYS NKLKSFSELK
NGATAAIPND PSNGARALQL FEKAGLIKLK PGIGIKATPA NIAENPKNLK IVELDAAQLP
RSLNDLDFSA VNLNYALSAG LDPKKALLLE DADTKWNLVF AVRAKNKDNP TLKKFVEIYR
SPEVKAFTDK RFDGTILTTW
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