Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3219 |
Symbol | |
ID | 4023726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3573047 |
End bp | 3573718 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637963421 |
Product | peptidase M50 |
Protein accession | YP_570345 |
Protein GI | 91977686 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGATC AATTCTCCAA CATGATGCTG GTGATTTCGG TGTGGGCGCT GCCGCTCGTC ATCGCAATCA CCTTCCACGA GGCGGCGCAC GCTTATGTGG CGCGGATGTG CGGCGACGAC ACCGCCTGGA TGCTCGGCCG CGTCACCCTC AATCCGATCA AGCATATCGA CCCGTTCGGG ACGATCCTGC TGCCGCTGCT GCTGCTCGCG CTGCAGTCGC CGTTCCTGTT CGGCTACGCC AAGCCGGTGC CGGTGAATTT TCGCGGGCTG CGGCATCCGC GGCGCGACAT GATTCTGGTG GCGGCGGCCG GCCCGGCGAT CAACCTCGTG CTTGCGCTGA TCGCGGCACT CGCCATTCGG CTGATCGACC TGCCCGGCGA AGCAGGCGAA TGGCTGATGC GCAATTTCGC CAACGCGCTG CTGATCAACG TCGTGCTGGC GATCTTCAAC CTGATTCCGA TTCCGCCGCT CGACGGCGGC CGGATCGCCG TCGGCGCGCT GCCGCGGGTG CTGGCGCGGC CGCTGGCGCG GCTCGAGCCC TACGGGATGC TGGTCCTGAT CGGGCTGGTG TTTCTGCTGC CGCTCGCCGG GTTCGGCGGC GCCACGCAAT GGATCGCGCA ATCGAGCCGT TTCGTCGTCG AGGCGATCCT GCGCCTGACC GGCAATGCCT GA
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Protein sequence | MTDQFSNMML VISVWALPLV IAITFHEAAH AYVARMCGDD TAWMLGRVTL NPIKHIDPFG TILLPLLLLA LQSPFLFGYA KPVPVNFRGL RHPRRDMILV AAAGPAINLV LALIAALAIR LIDLPGEAGE WLMRNFANAL LINVVLAIFN LIPIPPLDGG RIAVGALPRV LARPLARLEP YGMLVLIGLV FLLPLAGFGG ATQWIAQSSR FVVEAILRLT GNA
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