| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3217 |
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| Symbol | |
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| ID | 4023724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3569305 |
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| End bp | 3570468 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637963419 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_570343 |
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| Protein GI | 91977684 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.557937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCT CCGTCCCGCC GACCGGCCCC ACGCCTGATC CGCAAATCCG CCGGGCGCAG
CGCACCGACC GCCTGCTTCG CATCGCCGTG ATCTGGCTGC TGCTGCTGGC GACCGCCTGG
GTCGCGCAGC CTTATCTCGC CGCATTGTGG TTCTCGGTGT CCGGCCCGCG CACCGTCACC
GCGCGCGGCG ATCTCGCGCC GGCCGAGACC TCGACCATCG AGCTGTTCAA GCGGGTGTCG
CCTTCCGTGG TGCACGTCTA TGCCCAGTCG AGCCGACGAA CGCCGTCCTT GTTGGAGGCA
CAGCAGGGCG GGGTGCAGTC CGGCTCCGGC GTGATCTGGG ACGCCGCCGG TCACGTCATT
ACCAACAACC ACGTCATCCA GGGCGCGAGC GCGCTCGGCG CGCGGCTGTC GACCGGCGAG
TTCGTCACCG CCCGCGTGAT CGGCACCGCG CCGAACTACG ACCTCGCGGT GCTGCAGCTC
GAGCGACCGC GTGCGGCGCT GCGTCCGATC GCTATCGGGA GCTCGTCGGA TCTGCAGGTC
GGGCAGGCGG CTTTTGCGAT CGGCAGTCCT TATGGCCTGG AGCAGACGCT CACCACCGGC
ATCGTCAGCG CGTTGCAGCG TCGGCTCCCG ACCGCGGCGG CGCATGAAAT CAGCGGCGTG
ATCCAGACCG ACGCGGCGAT CAACCCGGGC AATTCAGGCG GTCCATTGCT CGACAGCGCC
GGCCGGCTGA TCGGGTTGAA CACCGCGATC ATCTCGGGCT CGGGCGCGTC GGCCGGCATC
GGCTTCGCCA TCCCCGTGGA TGCCGTCAAC CGCATCGCGA CCTCGCTGAT CCGCACCGGC
ACCGTGCCGG TTCCTGGAAT CGGCATCATC GCGGCCGACG AGAACGAGGC GGCGCGGCTC
GGGATCGACG GCGTCGTCGT GGTGCGGACG CTGCCGGACT CTCCGGCGGC GCGCGCCGGA
CTGACCGGCG CCAGCGAGAC CGGCATGGTG GAGGACGTCA TCATCGGCGC CAACGGCCAG
GAGATCCACA GCATGTCGGA TCTCGCCGCG GCGCTCGAAG GCATCGGCAT CGGCAGCGAT
GTCAAATTGC AGGTGATCCG CGACGGCCGC GCGCGGACGG TCAACGTGCA GGTGACCGAC
ATCTCTCGGC TGAAGCGGAA CTAG
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| Protein sequence | MPLSVPPTGP TPDPQIRRAQ RTDRLLRIAV IWLLLLATAW VAQPYLAALW FSVSGPRTVT
ARGDLAPAET STIELFKRVS PSVVHVYAQS SRRTPSLLEA QQGGVQSGSG VIWDAAGHVI
TNNHVIQGAS ALGARLSTGE FVTARVIGTA PNYDLAVLQL ERPRAALRPI AIGSSSDLQV
GQAAFAIGSP YGLEQTLTTG IVSALQRRLP TAAAHEISGV IQTDAAINPG NSGGPLLDSA
GRLIGLNTAI ISGSGASAGI GFAIPVDAVN RIATSLIRTG TVPVPGIGII AADENEAARL
GIDGVVVVRT LPDSPAARAG LTGASETGMV EDVIIGANGQ EIHSMSDLAA ALEGIGIGSD
VKLQVIRDGR ARTVNVQVTD ISRLKRN
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