Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3205 |
Symbol | |
ID | 4023711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3555571 |
End bp | 3556794 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637963406 |
Product | beta-lactamase |
Protein accession | YP_570331 |
Protein GI | 91977672 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGC ACGCCGCCGC CAAACCCGCC CCAGCCGCGC AGACGCCGCA GCTCGCACAG GCCAAGCCGG AGACGATCGG GCTGTCCTCC GCCCGCCTGC AGGCGATGTC CGACGCCTTC CAGCGCGAGA TCGACAAGGG CAGCATTCCC GGCGTCACGG TGCTGGTGTC ACGCCGCGGT CATATCGGCT GGTTCGAAGC GCTCGGCCGG CAGGCTCCCG GCCTCGAGAC GCCGATGCGT CGGGACAGCC TGTTCCGGAT CTTCTCGATG ACCAAGCCGA TCGTCTCGGT CGGCATCATG CAACTGGTCG AGGACGGCCA TCTGCAGCTC GACGATCCGC TGCAGAAATT CATTCCGGAG TTCGAGAACA CCAACGTTGG TGTCGTCGAG AACGGCAAGC TCGATCTGGT GCCGCTGGTG CGGCCGATCA CCATTCAGGA TTTGCTCCGC CACACCTCCG GGATCACCTA TGATCACGTC AGCGACGGCC CGATCCAGAA GATGTATCGC GAGTCCCGGG TCCGCAGCCG CAAGATCACC AACGAGGAGC ACGCCAGCCT GATCGCGGCG ATGCCGCTGG TGTGTCAGCC GGGCGCCGGG TGGAACTACA GCCGCTCCAC CGACATTCTC GGGCGCGTCA TCGAAGTCAT CTCCGGCAAG ACGCTCGGCG CGTTCCTGAA CGAGCGGATT CTCGCGCCGC TGCAGATGGC CGAGACGGCG TTCCACACCG GAGCGGAGAA CAAGGGCCGT CTCGCCCAAG CCTTCCCGAC CGATCCGTGG ACCGGCGATC CGGTGGCGCT GTTCGACATG CTGGAGAAGC CGGCGATGGA ATCCGGCGGC GGCGGGCTGG TGTCGACCAC AATGGACTAC GCGCGGTTCT GCCAGATGCT GCTGTCCGGC GGTTCGCTCG ACGGCGCCCG CATCATCGGC CGCAAGACGC TGCAATTGAT GGCGAGCAAT CACCTCGCCG CGCACATTCC GCCGGACAAC TACATCCTGC CGCCGGGCCA CGGCTTCGGG CTCGGCTTTG CGGTGCGCAC CGAGCCGGGC ATCGCCCCAT TTCCCGGCTC GGTCGGCCAG TTCTACTGGA GCGGCATCGC CGGGACGTTC TTCTGGATCG ATCCGGCAGA AGAGCTGTTC GCGGTGTTCA TGTCGCAGGG CCCGGGCCAA CGCGAGTATT TCCGCACGCT GGTGCGTAAT CTGGTGTACG CGGCGGTGGA GTAA
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Protein sequence | MTAHAAAKPA PAAQTPQLAQ AKPETIGLSS ARLQAMSDAF QREIDKGSIP GVTVLVSRRG HIGWFEALGR QAPGLETPMR RDSLFRIFSM TKPIVSVGIM QLVEDGHLQL DDPLQKFIPE FENTNVGVVE NGKLDLVPLV RPITIQDLLR HTSGITYDHV SDGPIQKMYR ESRVRSRKIT NEEHASLIAA MPLVCQPGAG WNYSRSTDIL GRVIEVISGK TLGAFLNERI LAPLQMAETA FHTGAENKGR LAQAFPTDPW TGDPVALFDM LEKPAMESGG GGLVSTTMDY ARFCQMLLSG GSLDGARIIG RKTLQLMASN HLAAHIPPDN YILPPGHGFG LGFAVRTEPG IAPFPGSVGQ FYWSGIAGTF FWIDPAEELF AVFMSQGPGQ REYFRTLVRN LVYAAVE
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