| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3200 |
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| Symbol | rplA |
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| ID | 4023705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3551271 |
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| End bp | 3551960 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963400 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_570326 |
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| Protein GI | 91977667 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.935977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCG GTAAGCGTTT GAAGAAGGCC CGCGAGGGTG TCGATCGCAC CAAGCTGTAT
CCGCTCGACG AAGCGGTGAA GATGGTGAAG GAGCGTGCGA CCTCGAAGTT CGACGAAACC
ATCGAAGTCG CGCTCAATCT CGGCGTTGAT CCGCGTCACG CCGACCAGAT GGTCCGCGGC
GTGGTGATGC TGCCGAACGG CACCGGCCGT ACCTTGCGGG TCGGCGTGTT CGCGCGCGGC
GCCAAGGCCG ACGAAGCCAA GGCGGCAGGC GCTGACGTCG TCGGCGCCGA GGACCTCGTC
GAGCAGGTCC AGGGCGGCAA CATCAACTTC GACCGCTGCA TCGCCACCCC CGACATGATG
CCGCTGGTCG GCCGTCTCGG TAAGGTGCTC GGTCCGCGCG GCATGATGCC GAACCCGAAG
ATCGGTACGG TGACGATGGA CGTCGCCGGC GCGGTCAAGG GCGCCAAGGG CGGCTCGGTC
GAGTTCCGCG TCGAGAAGGC CGGCATCGTG CAGGCCGGCG TCGGCAAGGC CTCGTTCACC
GAGGAGAAGC TGGTCGAGAA CATCAAGGCG CTCGCGGACG CGGTCACCAA GGCCAAGCCG
ACCGGCGCCA AGGGCACCTA CATCCAGCGC GTCGCGGTGT CGTCGAGCAT GGGCCCGGGC
GTCAAGGTCG AGCCGGGTTC GATTCACTAA
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| Protein sequence | MAIGKRLKKA REGVDRTKLY PLDEAVKMVK ERATSKFDET IEVALNLGVD PRHADQMVRG
VVMLPNGTGR TLRVGVFARG AKADEAKAAG ADVVGAEDLV EQVQGGNINF DRCIATPDMM
PLVGRLGKVL GPRGMMPNPK IGTVTMDVAG AVKGAKGGSV EFRVEKAGIV QAGVGKASFT
EEKLVENIKA LADAVTKAKP TGAKGTYIQR VAVSSSMGPG VKVEPGSIH
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