| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3199 |
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| Symbol | |
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| ID | 4023704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3550208 |
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| End bp | 3551158 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963399 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_570325 |
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| Protein GI | 91977666 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.922392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA AGGTTCTGGT GTTTTCGCGA TTCGCGAAGT CGATGCTGGC GCGGTTCGCC
GAAAAGTTCG AACTGCTCGA GACCGGCGGC AAGCCCGCGA ACGAAGTCTT CAGTGCCGCC
GAGCTCGCCG ACGTCCGCGC GTTGCTCACC ATGGGCGCTC AGCCGCTCGG CCGTGAAACG
CTCGACGCGC TGCCGTCGCT CGGCGCCATC GTCTGCTACG GCACCGGCTA TGACGGCGTC
GATCTCGACG CCGCGGCCGA ACGGAAGATC GCAATCGGCA ACAGCCCGGC GGCGAACGCC
TCCGCGGTCG CAGATCTGGC GATGACGCTG CTGCTCGGGC TGATGCGGCG GCTGTTGCCC
GCCGACGCTT ATCTGCGCAG CGGCGGATGG TCGGGCGCGC GGCCGTCGCC GCTGCTGCGG
CCGCCGCGCG GACTGACCAA TGCCCGGGTC GGCGTCTACG GCATGGGCGA AATCGGCCGT
AAGATCGCGG CGCGCGTCGC CGCGTTCGAG ACCGAGGTCG CGTATCACAG CCGCAGCCGC
CACGACGTGC CGTATCGCTA TGTCGGCGAT CTCGGAGAAC TGATCGACTG GTGCGACGTG
CTGCTGATCG CGGTCCGCGC CGGTCCGGAC ACGGAGCGCA TCATCGACGC GGCGATGCTG
AAGCGGCTCG GCGCGGACGG CGTGCTGGTC AACATCTCGC GCGGCTCGGT GATCGATCAG
CCGGCGCTGA TCGCGGCGCT GGCCGACAAG ACCATCGCAG GCGCAGGGCT CGACGTGTTC
GAGCGGGAGC CCTATGCGCC GGACGCGCTC AGCGAGTTCC CCAACGTGGT GCTGACGCCG
CATATCGGCG GCCACACTTT GGAAGCCCAT GTGGCGATGC AGGATTGCGT GATCGCCAAT
CTGGCGGCGT TTTTTGCAGG CAAGCCGTTG CCATACCTGG TGAAGGGCTG A
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| Protein sequence | MADKVLVFSR FAKSMLARFA EKFELLETGG KPANEVFSAA ELADVRALLT MGAQPLGRET
LDALPSLGAI VCYGTGYDGV DLDAAAERKI AIGNSPAANA SAVADLAMTL LLGLMRRLLP
ADAYLRSGGW SGARPSPLLR PPRGLTNARV GVYGMGEIGR KIAARVAAFE TEVAYHSRSR
HDVPYRYVGD LGELIDWCDV LLIAVRAGPD TERIIDAAML KRLGADGVLV NISRGSVIDQ
PALIAALADK TIAGAGLDVF EREPYAPDAL SEFPNVVLTP HIGGHTLEAH VAMQDCVIAN
LAAFFAGKPL PYLVKG
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