| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3189 |
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| Symbol | rpsL |
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| ID | 4023694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3531014 |
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| End bp | 3531385 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637963390 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_570316 |
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| Protein GI | 91977657 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.863233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGACGA TCAACCAGCT GATCGCAAAT CCGCGCGTTG TGCAGAAGTC GCGCAAGAAG
GTTCCGGCGC TCCAGCAGTC GCCGCAGAAG CGCGGCGTCT GCACCCGCGT CTACACCACG
ACTCCGAAGA AGCCGAACTC GGCGCTCCGT AAGGTCGCCA AGGTTCGTCT GACCAACGGC
TTCGAGGTGA TCGGTTACAT CCCGGGTGAA GGCCACAACC TTCAAGAGCA CTCGGTGGTG
ATGATCCGCG GCGGCCGCGT CAAGGATTTG CCGGGCGTGC GCTACCACAT TCTCCGCGGC
GTCCTCGATA CCCAGGGCGT CAAGAACCGT AAGCAGCGTC GTTCGAAGTA CGGCGCGAAG
CGTCCGAAGT AA
|
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| Protein sequence | MPTINQLIAN PRVVQKSRKK VPALQQSPQK RGVCTRVYTT TPKKPNSALR KVAKVRLTNG
FEVIGYIPGE GHNLQEHSVV MIRGGRVKDL PGVRYHILRG VLDTQGVKNR KQRRSKYGAK
RPK
|
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