| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3185 |
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| Symbol | rpsJ |
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| ID | 4023690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3526802 |
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| End bp | 3527110 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637963386 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_570312 |
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| Protein GI | 91977653 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.887844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGGCC AAAATATTCG CATTCGCCTC AAGGCGTTTG ACCATCGGAT TCTCGATACG
TCGACGCGTG AGATCGTCAA CACCGCGAAG CGAACCGGTG CGCAGGTGCG CGGGCCGATC
CCGCTGCCGA CCCGGATCGA GAAATTCACT GTCAACCGTT CGCCGCACGT CGATAAGAAG
AGCCGCGAGC AGTTCGAGAT GCGCACTCAC AAGCGCCTTC TCGACATCGT CGACCCGACC
CCGCAGACCG TCGATGCTTT GATGAAGCTC GACCTCGCTG CCGGCGTCGA CGTCGAAATC
AAGCTCTGA
|
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| Protein sequence | MNGQNIRIRL KAFDHRILDT STREIVNTAK RTGAQVRGPI PLPTRIEKFT VNRSPHVDKK
SREQFEMRTH KRLLDIVDPT PQTVDALMKL DLAAGVDVEI KL
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