| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3183 |
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| Symbol | rplD |
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| ID | 4023688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3525405 |
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| End bp | 3526025 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963384 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_570310 |
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| Protein GI | 91977651 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.611189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTGA AAGTCACCAC TCTCGAAGGT AAGGAAGCGG GCTCGGTCCA GCTTTCCGAC
GCCATCTTCG GTCTCGAGCC GCGTCAGGAC ATTGTGCAGC GCTGCGTGAT CTGGCAGCTC
GCCAAGCGTC AGGCCGGCAC TCACAAGGCG AAGGGCCGCG CCGAGATCTG GCGCACCGGC
AAGAAGATGT ACAAGCAGAA GGGCACCGGT GGCGCCCGTC ACGGTTCGCA ACGCGTTCCG
CAGTTCCGCG GCGGTGGCCG TGCGTTCGGT CCGGTGGTGC GTTCGCACGC CATCGACCTG
CCGAAGAAGG TCCGGGCCCT GGCGCTGAGG CATGCGCTCT CGGCGAAGGC CAAGGGCGGC
GGGCTGATCG TGATCGACAA GGCCGAACTC GAAGCGGCGA AGACCAAGGC TCTGGTCGGC
GCTTTCTCGG GCCTCGGTCT GACCAACGCG CTGATCATCG ACGGCGCCGA GGTCAATAAC
GGGTTCGCCA CGGCGGCCCG CAACATCCCG AACATCGACG TGCTGCCTGT CCAGGGCATC
AACGTCTACG ATATCGTGCG CCGTCGGAAG TTGGTTCTGA CGAAGGCCGC TCTCGATGCG
TTGGAGGCGC GCTTCAAATG A
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| Protein sequence | MELKVTTLEG KEAGSVQLSD AIFGLEPRQD IVQRCVIWQL AKRQAGTHKA KGRAEIWRTG
KKMYKQKGTG GARHGSQRVP QFRGGGRAFG PVVRSHAIDL PKKVRALALR HALSAKAKGG
GLIVIDKAEL EAAKTKALVG AFSGLGLTNA LIIDGAEVNN GFATAARNIP NIDVLPVQGI
NVYDIVRRRK LVLTKAALDA LEARFK
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