Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3179 |
Symbol | rplV |
ID | 4023684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3523572 |
End bp | 3523958 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637963380 |
Product | 50S ribosomal protein L22 |
Protein accession | YP_570306 |
Protein GI | 91977647 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0091] Ribosomal protein L22 |
TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC CCAAGCGCGA ACGGGTCCTC CCCGATAATG AGGCCAAGGC CGTCGCCCGG ATGCTTCGCG TCAGCCCGCA GAAGCTCAAT CTGGTCGCTC AGCTGATCCG CGGCCGCAAG GCTGCGGCGG CGCTCGCCGA CCTGCAGTTC TCGCGCAAGC GGATCGCGGT CGACGTCAAG AAGTGCCTTG AATCGGCGAT CGCCAACGCC GAGAACAACC ATGACCTCGA TGTCGACGCG CTCGTCGTGT CCGAGGCCCA TGTCGGCAAG GGCATCGTGA TGAAGCGTTT CTCTCCGCGC GGCCGCGGCC GCTCGGGCCG TATTCTTAAA CCATTCGCGC AGCTGACGAT CGTCGTTCGT CAGGTCGAAG CCGAAGCAAG CGCTTAA
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Protein sequence | MSKPKRERVL PDNEAKAVAR MLRVSPQKLN LVAQLIRGRK AAAALADLQF SRKRIAVDVK KCLESAIANA ENNHDLDVDA LVVSEAHVGK GIVMKRFSPR GRGRSGRILK PFAQLTIVVR QVEAEASA
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