Gene RPD_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3179 
SymbolrplV 
ID4023684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3523572 
End bp3523958 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content64% 
IMG OID637963380 
Product50S ribosomal protein L22 
Protein accessionYP_570306 
Protein GI91977647 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC CCAAGCGCGA ACGGGTCCTC CCCGATAATG AGGCCAAGGC CGTCGCCCGG 
ATGCTTCGCG TCAGCCCGCA GAAGCTCAAT CTGGTCGCTC AGCTGATCCG CGGCCGCAAG
GCTGCGGCGG CGCTCGCCGA CCTGCAGTTC TCGCGCAAGC GGATCGCGGT CGACGTCAAG
AAGTGCCTTG AATCGGCGAT CGCCAACGCC GAGAACAACC ATGACCTCGA TGTCGACGCG
CTCGTCGTGT CCGAGGCCCA TGTCGGCAAG GGCATCGTGA TGAAGCGTTT CTCTCCGCGC
GGCCGCGGCC GCTCGGGCCG TATTCTTAAA CCATTCGCGC AGCTGACGAT CGTCGTTCGT
CAGGTCGAAG CCGAAGCAAG CGCTTAA
 
Protein sequence
MSKPKRERVL PDNEAKAVAR MLRVSPQKLN LVAQLIRGRK AAAALADLQF SRKRIAVDVK 
KCLESAIANA ENNHDLDVDA LVVSEAHVGK GIVMKRFSPR GRGRSGRILK PFAQLTIVVR
QVEAEASA