| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3177 |
|---|
| Symbol | rplP |
|---|
| ID | 4023682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3522403 |
|---|
| End bp | 3522816 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637963378 |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_570304 |
|---|
| Protein GI | 91977645 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.943989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAAC CAAAGAAGAC CAAGTTCCGC AAGGCGCACA AGGGCCGCAT CCACGGCGTT
GCGTCGTCGG GCGCGACTCT GGCGTTCGGC CAGTTCGGGT TGAAGGCGAT GGAGCCTGAG
CGCGTCACCG CGCGCCAGAT CGAAGCCGCC CGTCGTGCGC TGACCCGCCA CATGAAGCGC
GCCGGCCGCG TCTGGATCCG GATTTTCCCG GACGTTCCGG TGTCGAAGAA GCCGGCCGAA
GTCCGCATGG GCTCCGGCAA GGGCGCGCCG GAATTGTGGG TCGCCCGCGT CAAGCCTGGC
CGGGTGATGT TCGAGATCGA CGGCGTCAAC CAGCAGATCG CCCGCGAAGC GCTGACGCTG
GCCGCCGCCA AGCTGCCGAT CAAGACGCGC TTCGTCGCGC GCATCGCGGA ATAG
|
|---|
| Protein sequence | MMQPKKTKFR KAHKGRIHGV ASSGATLAFG QFGLKAMEPE RVTARQIEAA RRALTRHMKR
AGRVWIRIFP DVPVSKKPAE VRMGSGKGAP ELWVARVKPG RVMFEIDGVN QQIAREALTL
AAAKLPIKTR FVARIAE
|
|---|
| |