Gene RPD_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3171 
SymbolrpsN 
ID4023676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3520281 
End bp3520586 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content61% 
IMG OID637963372 
Product30S ribosomal protein S14 
Protein accessionYP_570298 
Protein GI91977639 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0199] Ribosomal protein S14 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.743525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.672808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA AGAGTTCGAT CGAGAAGAAC AATCGTCGGC GGAAGATGAC CAAGAACGCG 
GCGCCCAAGC GCGCCCGTCT GAAGGCCATC ATCGCCGACA AGGACCTCCC GATGGAGGAG
CGTTTCGCGG CGACCTTGAA GCTCGCCGAG ATGCCGCGCA ATTCGTCGGC GACCCGGATT
CGCAACCGTT GCGAAATCAC CGGCCGTTCG CGCTCGGTCT ACCGCCTGAA CAAGCTGAGC
CGTATCGCGA TCCGCGATCT CGGTTCCAAG GGCTTGGTTC CGGGCCTCGT CAAGTCGAGC
TGGTAA
 
Protein sequence
MAKKSSIEKN NRRRKMTKNA APKRARLKAI IADKDLPMEE RFAATLKLAE MPRNSSATRI 
RNRCEITGRS RSVYRLNKLS RIAIRDLGSK GLVPGLVKSS W