| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3166 |
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| Symbol | rpmD |
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| ID | 4023671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3517960 |
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| End bp | 3518154 |
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| Gene Length | 195 bp |
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| Protein Length | 64 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637963367 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_570293 |
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| Protein GI | 91977634 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.146621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.436051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAAGG CCGCAAACAT CATCAAGGTC GAGCAGATCG GCAGCGCAAT CCGCCGCCAT
CACTCGCAGC GTGCGACGCT GGTCGGCCTC AAGCTCAACA AGATCGGCCG AGTCACCGAG
CTTCAGGATA CGCCTGAGGT TCGCGGCATG ATCGCCAAGG TTCAACACCT CGTTCGCGTC
GTCGACGAGA AGTAA
|
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| Protein sequence | MAKAANIIKV EQIGSAIRRH HSQRATLVGL KLNKIGRVTE LQDTPEVRGM IAKVQHLVRV
VDEK
|
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| |