Gene RPD_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3158 
Symbol 
ID4023663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3510848 
End bp3511864 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content65% 
IMG OID637963359 
Productalcohol dehydrogenase GroES-like protein 
Protein accessionYP_570285 
Protein GI91977626 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02817] zinc-binding alcohol dehydrogenase family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.187629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.496916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTA TCGGCTATAC GAAACCCCTT CCGATCGACG ACGCTGATGC CCTGATCGAG 
TTCGATACGC CGCGGCCCGA GCCCGGCCCG CGCGATCTGC GCGTCGCGGT CAAGGCGATC
TCGGTCAACC CGGTCGACTT CAAGGTCCGC AACCGGGCCG CACCGCCGGC AGGCGAGACC
AAGATCCTCG GCTACGACGC CGCCGGCGTG GTCGAAGCGA TCGGCAGCGA CGTCTCACTG
TTCAAGCCGG GCGACGAAGT GTTCTACGCA GGCTCGATCC AGCGCCCCGG CACCAATGCC
GAATTTCATC TGGTCGACGA GCGCATCGTC GGCCGCAAGC CGACCACCCT CTCGTTCGCG
CAGGCCGCGG CGCTGCCGCT GACCTCGATC ACCGCGTGGG AATTGCTGTT CGACCGGCTC
GGCGTGCGGC CGGGCAAGGC CTACGATCCG CGTACATTGC TGATCACCGG CGGGGCCGGC
GGCGTCGGCT CGATCCTGAT CCAACTCGCG CGAAAACTCA CGTCGCTGAC CGTGATCGCG
ACCGCATCGC GGCCCGAGAC CGAGACATGG TGCCGCGCGC TCGGCGCCAA TGCGGTGATC
GATCATTCCA AGCCGATGAA GCCGCAGATC GACGCGCTGA AGCTGCCGCC GGTGGCGCTG
ATCGCCAGCC TCATCGGCAC CGAGCAACAC TTTCCGGCGC TGGTGGAGAT TCTCGCGCCG
CAGGGCAAGA TCGCATTGAT CGACGATCCG GCGTCGCTGA ATCCGATGCT GCTCAAGCCG
AAATCCGCAT CGCTGCATTG GGAGGCGATG TTTGTGCGCT CGACCTTCAC GACCGCCGAC
ATGATCGCGC AGCACGATCT CCTGAACGAA GTCGCCGATC TGATCGACGC CGGCGTGCTG
CGCACCACGC TGGAGCAAAC CTTCGGCGCC ATCAACGCAG CGAATCTCAA GCGCGCCCAC
GCGTTGCTGG AGAGCGGAAA ATCGGTCGGC AAGATCGTGC TGGAGGGGTG GGAGTAG
 
Protein sequence
MKAIGYTKPL PIDDADALIE FDTPRPEPGP RDLRVAVKAI SVNPVDFKVR NRAAPPAGET 
KILGYDAAGV VEAIGSDVSL FKPGDEVFYA GSIQRPGTNA EFHLVDERIV GRKPTTLSFA
QAAALPLTSI TAWELLFDRL GVRPGKAYDP RTLLITGGAG GVGSILIQLA RKLTSLTVIA
TASRPETETW CRALGANAVI DHSKPMKPQI DALKLPPVAL IASLIGTEQH FPALVEILAP
QGKIALIDDP ASLNPMLLKP KSASLHWEAM FVRSTFTTAD MIAQHDLLNE VADLIDAGVL
RTTLEQTFGA INAANLKRAH ALLESGKSVG KIVLEGWE