| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3141 |
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| Symbol | |
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| ID | 4023646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3496142 |
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| End bp | 3496621 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637963342 |
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| Product | redox-sensitive transcriptional activator SoxR |
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| Protein accession | YP_570268 |
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| Protein GI | 91977609 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.814433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.503062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCTC CGATGCTCGA TGTTAAACGT CCGCTCACGG TTGGCGAGGT CGCCAGACGA
AGCGGCGTCG CGGTATCGAC GATCCACTTT TACGAAGGCA AAGGGCTCAT CGCAGGCTGG
CGAAACGCCG GTAACCAGCG ACGATACACA CGGGACACAC TGCGGCGGGT GGCGATCGTC
AAAGTCGCAC AACGAGCGGG TATTTCCCTC TCCGAGATTG CGACTGCATT GAAGGATATA
CCGCTCGACC GCGTGGTGAC GGCGCAGGAT TGGAAGTTAT TGTCGAGCAA ATGGCGCGAG
ATGCTCAACG AGCGAATTGT TCGCCTGACT CAGCTACGCG ATCAGATGGA TAGCTGTATC
GGCTGTGGAT GCCTGTCGAT GACAGACTGC CCGTTGCGCA ACCCGGCCGA TCAACTCGAG
GCAACGGGCA CTGGCGCTGT TCTGCTTGAA CTCGAGGTTG GAACGTCGTC GTCGACATAA
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| Protein sequence | MSPPMLDVKR PLTVGEVARR SGVAVSTIHF YEGKGLIAGW RNAGNQRRYT RDTLRRVAIV
KVAQRAGISL SEIATALKDI PLDRVVTAQD WKLLSSKWRE MLNERIVRLT QLRDQMDSCI
GCGCLSMTDC PLRNPADQLE ATGTGAVLLE LEVGTSSST
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