Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3132 |
Symbol | |
ID | 4023637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3484440 |
End bp | 3485210 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637963333 |
Product | ABC transporter related |
Protein accession | YP_570259 |
Protein GI | 91977600 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0678345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.466722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGA CCAACAACAT CGTCCTGCAC ATCGACCACG TCCACAAGAC CTTCGCGGGC CTGCATGCGC TGGCCGATGT GAACCTGGAT ATCCGCGAGG GCGAAACCCA CGCCATCATC GGGCCCAACG GCGCCGGCAA GTCGACGCTG CTCAACGTCT GCGTCGGCGT GCTGCCGCCG ACCCAGGGCA AGGTGATGTT CCACGGCACC GAGCTGACCG GGCTGCGCCC CTACGAGATC AACCAGCTCG GCGTGGCGCG GGTGTTTCAG ACGCCGGAGA TCTTCGGCGA TCTCACCGTG CTCGAGAACG TGATGATGGC GATGCTGTCG CATCGCGATG GCGCATTCCG GCTCAAGCTG GTGTCGCGGT TCGACGAGCA GGGCGAGATC GGCCAGCGCG CCATCCAGGC GCTGCGTGAG CGCGGGCTGG GCGAGCATCT GTATCATCTC GGCGGTGCGC TTTCGCGCGG AGACAAACGC CGGCTCGAGA TGGTGATCGG GCTGGTGCAG AAGCCGAAGC TGTTGTTGCT CGACGAGCCG ACCGCCGGCA TGGCGCGCGC CGACACCAAT GCAACCATCG ATATCCTGCG GCAGATCAAG GATTCGGGGA TGACCATCGT CATCATCGAG CACGACATGC ACGTGGTGTT TTCGCTCGCC GACCGCATCA CGGTGCTGGC CGGCGGACGC GTGATCGCGC AGGGCGTGCC CGACGAGATC AAGGGCAATC CCAAGGTGAT CGAGGCCTAT CTCGGCGAGG AACAGGTATG A
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Protein sequence | MTATNNIVLH IDHVHKTFAG LHALADVNLD IREGETHAII GPNGAGKSTL LNVCVGVLPP TQGKVMFHGT ELTGLRPYEI NQLGVARVFQ TPEIFGDLTV LENVMMAMLS HRDGAFRLKL VSRFDEQGEI GQRAIQALRE RGLGEHLYHL GGALSRGDKR RLEMVIGLVQ KPKLLLLDEP TAGMARADTN ATIDILRQIK DSGMTIVIIE HDMHVVFSLA DRITVLAGGR VIAQGVPDEI KGNPKVIEAY LGEEQV
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