Gene RPD_3132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3132 
Symbol 
ID4023637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3484440 
End bp3485210 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID637963333 
ProductABC transporter related 
Protein accessionYP_570259 
Protein GI91977600 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0678345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.466722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGA CCAACAACAT CGTCCTGCAC ATCGACCACG TCCACAAGAC CTTCGCGGGC 
CTGCATGCGC TGGCCGATGT GAACCTGGAT ATCCGCGAGG GCGAAACCCA CGCCATCATC
GGGCCCAACG GCGCCGGCAA GTCGACGCTG CTCAACGTCT GCGTCGGCGT GCTGCCGCCG
ACCCAGGGCA AGGTGATGTT CCACGGCACC GAGCTGACCG GGCTGCGCCC CTACGAGATC
AACCAGCTCG GCGTGGCGCG GGTGTTTCAG ACGCCGGAGA TCTTCGGCGA TCTCACCGTG
CTCGAGAACG TGATGATGGC GATGCTGTCG CATCGCGATG GCGCATTCCG GCTCAAGCTG
GTGTCGCGGT TCGACGAGCA GGGCGAGATC GGCCAGCGCG CCATCCAGGC GCTGCGTGAG
CGCGGGCTGG GCGAGCATCT GTATCATCTC GGCGGTGCGC TTTCGCGCGG AGACAAACGC
CGGCTCGAGA TGGTGATCGG GCTGGTGCAG AAGCCGAAGC TGTTGTTGCT CGACGAGCCG
ACCGCCGGCA TGGCGCGCGC CGACACCAAT GCAACCATCG ATATCCTGCG GCAGATCAAG
GATTCGGGGA TGACCATCGT CATCATCGAG CACGACATGC ACGTGGTGTT TTCGCTCGCC
GACCGCATCA CGGTGCTGGC CGGCGGACGC GTGATCGCGC AGGGCGTGCC CGACGAGATC
AAGGGCAATC CCAAGGTGAT CGAGGCCTAT CTCGGCGAGG AACAGGTATG A
 
Protein sequence
MTATNNIVLH IDHVHKTFAG LHALADVNLD IREGETHAII GPNGAGKSTL LNVCVGVLPP 
TQGKVMFHGT ELTGLRPYEI NQLGVARVFQ TPEIFGDLTV LENVMMAMLS HRDGAFRLKL
VSRFDEQGEI GQRAIQALRE RGLGEHLYHL GGALSRGDKR RLEMVIGLVQ KPKLLLLDEP
TAGMARADTN ATIDILRQIK DSGMTIVIIE HDMHVVFSLA DRITVLAGGR VIAQGVPDEI
KGNPKVIEAY LGEEQV