Gene RPD_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3127 
Symbol 
ID4023632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3479049 
End bp3479834 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID637963328 
ProductATP12 ATPase 
Protein accessionYP_570254 
Protein GI91977595 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5387] Chaperone required for the assembly of the mitochondrial F1-ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.922755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.579197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAAT TGTTCGAAGA CGTCGCAGGA AAATCCCTGC TCGATCCGGA GGAAGCGGTG 
CGGCGCACGA CGCGCACCGC GCTGCCGAAG CGGTTCTACA CCGAGGCTGG TATCACCGAA
GCAGCCGACG GCTTTGCGAT CACGCTCGAT GGTCGCGGCG TCAAGACGCC GTCGCGAAAT
GCACTCACCG CGCCGACGCG CGAATTGGCC GAGGCGATCG CCGCCGAATG GCAGGCGCAG
CAGGAACTGA TCGATCCGAC CACGATGCCG CTGACGCGGC TCGCCAACAG CGTGATCGAC
GGCGTCGTGG GGCGCGTCGA GGCGGTCCGT GACGACGTCG CCAAGTATTT CGGCTCAGAC
CTATTGTTCT ATCGCGCCAG CCATCCCGAG GAACTGATCG CGCTGGAAGC GCAGCACTGG
GACCCCGTGC TGTTCTGGGC GGCGGACGAG TTCGGCGCGC ATTTCATCCT CGCCGAGGGC
ATCGTGCATG TGAGCCAGCC CGAACCCGCG ATCGCGGCCG CGCGCGGGGC GATGCCGCAA
GACCCCTGGT CGGTCGGCGC CTTCCATGTG GTGACCACCA TCACCGGCTC GGCGCTGCTG
GCGCTGGCGC TGGTCAGGGG ACTGCGCGAT CCCGATCAGG TCTGGACCGC CGCCCATGTC
GACGAGGACT GGAACATTGC GCGCTGGGGC CTCGATGAGG AAGTCGCGGC GCGGCGCGCA
GCGCGCGAGA TCGAGTTCAA GGCCGCAGCT CAGGTGCTGG CCGCCTTGAC CCGGCGCGGA
AGTTAA
 
Protein sequence
MRELFEDVAG KSLLDPEEAV RRTTRTALPK RFYTEAGITE AADGFAITLD GRGVKTPSRN 
ALTAPTRELA EAIAAEWQAQ QELIDPTTMP LTRLANSVID GVVGRVEAVR DDVAKYFGSD
LLFYRASHPE ELIALEAQHW DPVLFWAADE FGAHFILAEG IVHVSQPEPA IAAARGAMPQ
DPWSVGAFHV VTTITGSALL ALALVRGLRD PDQVWTAAHV DEDWNIARWG LDEEVAARRA
AREIEFKAAA QVLAALTRRG S