Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3127 |
Symbol | |
ID | 4023632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3479049 |
End bp | 3479834 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637963328 |
Product | ATP12 ATPase |
Protein accession | YP_570254 |
Protein GI | 91977595 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5387] Chaperone required for the assembly of the mitochondrial F1-ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.922755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.579197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAAT TGTTCGAAGA CGTCGCAGGA AAATCCCTGC TCGATCCGGA GGAAGCGGTG CGGCGCACGA CGCGCACCGC GCTGCCGAAG CGGTTCTACA CCGAGGCTGG TATCACCGAA GCAGCCGACG GCTTTGCGAT CACGCTCGAT GGTCGCGGCG TCAAGACGCC GTCGCGAAAT GCACTCACCG CGCCGACGCG CGAATTGGCC GAGGCGATCG CCGCCGAATG GCAGGCGCAG CAGGAACTGA TCGATCCGAC CACGATGCCG CTGACGCGGC TCGCCAACAG CGTGATCGAC GGCGTCGTGG GGCGCGTCGA GGCGGTCCGT GACGACGTCG CCAAGTATTT CGGCTCAGAC CTATTGTTCT ATCGCGCCAG CCATCCCGAG GAACTGATCG CGCTGGAAGC GCAGCACTGG GACCCCGTGC TGTTCTGGGC GGCGGACGAG TTCGGCGCGC ATTTCATCCT CGCCGAGGGC ATCGTGCATG TGAGCCAGCC CGAACCCGCG ATCGCGGCCG CGCGCGGGGC GATGCCGCAA GACCCCTGGT CGGTCGGCGC CTTCCATGTG GTGACCACCA TCACCGGCTC GGCGCTGCTG GCGCTGGCGC TGGTCAGGGG ACTGCGCGAT CCCGATCAGG TCTGGACCGC CGCCCATGTC GACGAGGACT GGAACATTGC GCGCTGGGGC CTCGATGAGG AAGTCGCGGC GCGGCGCGCA GCGCGCGAGA TCGAGTTCAA GGCCGCAGCT CAGGTGCTGG CCGCCTTGAC CCGGCGCGGA AGTTAA
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Protein sequence | MRELFEDVAG KSLLDPEEAV RRTTRTALPK RFYTEAGITE AADGFAITLD GRGVKTPSRN ALTAPTRELA EAIAAEWQAQ QELIDPTTMP LTRLANSVID GVVGRVEAVR DDVAKYFGSD LLFYRASHPE ELIALEAQHW DPVLFWAADE FGAHFILAEG IVHVSQPEPA IAAARGAMPQ DPWSVGAFHV VTTITGSALL ALALVRGLRD PDQVWTAAHV DEDWNIARWG LDEEVAARRA AREIEFKAAA QVLAALTRRG S
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