| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3104 |
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| Symbol | |
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| ID | 4023609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3449580 |
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| End bp | 3450344 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963305 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_570231 |
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| Protein GI | 91977572 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0244002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA GCAATCGCGT CGTCCTGGTC ACCGGCGCCG CCTCCGGCCT CGGCGCCGCC
ACCGCCCGCA GCCTCGTCGC CGCGGGCGCC AAGGTGGTCG GCCTCGACCT CAATGCCGCC
GCCGGCGCCG TGCTCGAAGC CGACCTCGGC GGCAGCTTCC GCTTCCTCAC CACCGACGTC
ACCAAGGAAG AAGACGGCCA GGCGGCGGTG AAGCTGGCGC AGGAGCTCGG CCAGCTTTCC
GGCCTGGTCA ATTGCGCCGG CATCGCCCCC GGCGAAAAGG TGGTCGGCCG CAAGGGCCCG
CATCAGCTCG CCAGCTTCGC CCGCGCCATC TCGATCAATC TGGTCGGCAC CTTCAATATG
ATCCGGCTCG CCGCCGAGGC GATGATCCAG CAGCCGGCGA ATGATCAGGG CGAACGCGGC
GTGATCATCA ACACCGCCTC GGTAGCGGCG TTCGACGGCC AGATCGGCCA GGCCGCCTAC
TCCGCCTCCA AGGGCGGCGT TGCGGCGATG ACGCTGCCGG TGGCGCGCGA ACTGGCGCAG
CACGGCATCC GCGTCGTCAC CATCGCGCCG GGCATTTTCG AGACGCCGAT GATGGCGGGA
ATGCCGCAGG AGGTGCAGGA TGCGCTCGGC AAGAGCGTGC CGTTCCCGCC GCGCCTCGGC
CGGCCGTCGG AATATGCCGA TCTGGTGCAG CACATCATCG CCAATACCAT GTTGAATGGC
GAGGTGATCC GCCTCGACGG CGCGCTGCGC ATGGCTCCGC GCTGA
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| Protein sequence | MNISNRVVLV TGAASGLGAA TARSLVAAGA KVVGLDLNAA AGAVLEADLG GSFRFLTTDV
TKEEDGQAAV KLAQELGQLS GLVNCAGIAP GEKVVGRKGP HQLASFARAI SINLVGTFNM
IRLAAEAMIQ QPANDQGERG VIINTASVAA FDGQIGQAAY SASKGGVAAM TLPVARELAQ
HGIRVVTIAP GIFETPMMAG MPQEVQDALG KSVPFPPRLG RPSEYADLVQ HIIANTMLNG
EVIRLDGALR MAPR
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