| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3098 |
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| Symbol | |
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| ID | 4023602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3441798 |
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| End bp | 3443261 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963298 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | YP_570225 |
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| Protein GI | 91977566 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.383524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0341678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACA ACACGCCCCG CCCCGTCATC GTTTGGTTTC GCGACGATCT GCGGCTGTCC
GATCACCCTG CCCTGCATCA AGCTGCCGCA TCCGGCGGAC CGCTGATCTG CATCTACGTC
TTCGACGAAG ACAGCGCGCA GCTCCGCTCG CCGCAGGCCA GACCGCTCGG CGGCGCATCG
CGCTGGTGGC TGGCGCAATC GCTGCGCGCG CTCGCTGCCA GTTTGGAGAA GCGCGGCGCG
CGGCTGATCC TGCGCCGCGG ACCGGCCGCC GCGATCATCG CCGAGCTGGC GCGCCAGGTC
GACGCCAGCG CGGTGCACTG GAACGAGATC GAGATCGCGC CGCATCGCGC GGTCGCCGAC
GACCTCGCCG AAGCGTTGAG CGTCGCCGGG ATCGATCACC ACCGCCATCG CGGCGATCTG
CTCGCTTCGC CAGCGGAGGT GCGCACCAAA GAAGGCCGCG GACTGCGCGT GTTCACGCCG
TTCTGGCGAC GCGTGCTCGG CCTTGGCGAT CCGCCGAAGC TGCTGCCGGC GCCGAAAACC
CTGAGTGCCG CGCAAGGTCC GTCCGGCGAT CAGCTTGATA GCTGGATGCT CGAGCCGACC
GAACCGGACT GGGCCGGCGG CCTGCGCGAA AGCTGGACGC CCGGCGAAGG CGCCGCGCAA
GACAACCTCA CCGCATTCCT CGACGCCCTG CCCGGCTACA CCGAAGGCCG CGACCGGCCC
GACTGCGCTG CGACGTCGCG GCTGTCGCCG CATCTGCGGT TCGGCGAGAT CAGCCCGCGT
CAGGTCTGGT ACGCGGCGCG GTTCGCCGCG GCGGAGCGGC CCGCGATCGC CGGCGACATC
GACAAGTTCC TGAGCGAACT CGGCTGGCGC GAGTTCTGCC GGCATTTGCT GCACGATCAT
CCCGATCTCG CCGAGCGCAA TCTGCAGGCC TCATTCGACG CCTTTCCCTG GATCACCGAC
GCCGCCGCGC TGCACGCCTG GCAGCGCGGC TGCACCGGTT ATCCGATCGT CGATGCGGGA
ATGCGCGAGC TCTGGCACAC CGGCGTGATG CACAATCGCG TCCGCATGGT GGTGGCGTCG
TTCCTGGTGA AGCATCTGCT GATCGACTGG CGCTGCGGCG AGCAATGGTT CTGGGACACG
CTGGTCGACG CCGATGCCGG CAGCAATCCG GCCAATTGGC AGTGGGTCGC GGGCTCCGGC
GCCGATGCCG CGCCGTATTT TCGCGTGTTC AATCCCATCC TGCAGGGAGA AAAATTCGAC
CCGGCCGGCG ACTATGTGCG TCGCTGGGTG CCTGAACTCG CCTCGCTTCC CGCTAAATTC
ATCCACCAGC CATGGACTGC GACGCCGTTC GAACTCGCAG CGGCGGGCGT CACACTCGGC
GGCAATTATC CGGAGCCGAT CATCGATCAC CGGGTCGGAC GCGAGCGCGC GCTTGCGGCT
TACGCCAAAA CGCGTCAGCA TTGA
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| Protein sequence | MPNNTPRPVI VWFRDDLRLS DHPALHQAAA SGGPLICIYV FDEDSAQLRS PQARPLGGAS
RWWLAQSLRA LAASLEKRGA RLILRRGPAA AIIAELARQV DASAVHWNEI EIAPHRAVAD
DLAEALSVAG IDHHRHRGDL LASPAEVRTK EGRGLRVFTP FWRRVLGLGD PPKLLPAPKT
LSAAQGPSGD QLDSWMLEPT EPDWAGGLRE SWTPGEGAAQ DNLTAFLDAL PGYTEGRDRP
DCAATSRLSP HLRFGEISPR QVWYAARFAA AERPAIAGDI DKFLSELGWR EFCRHLLHDH
PDLAERNLQA SFDAFPWITD AAALHAWQRG CTGYPIVDAG MRELWHTGVM HNRVRMVVAS
FLVKHLLIDW RCGEQWFWDT LVDADAGSNP ANWQWVAGSG ADAAPYFRVF NPILQGEKFD
PAGDYVRRWV PELASLPAKF IHQPWTATPF ELAAAGVTLG GNYPEPIIDH RVGRERALAA
YAKTRQH
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