| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3097 |
|---|
| Symbol | |
|---|
| ID | 4023601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3441283 |
|---|
| End bp | 3441681 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637963297 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_570224 |
|---|
| Protein GI | 91977565 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4852] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.23708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0273238 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCGGT ATGGCGTTCT CTATCTGGCG ACGTTCATTG TCCTGATCCC GCTGGATTTC
CTGTTTCTCG GCTTCATTGC GAAGGACTTC TTCGCCAGCC AGGTCGGCGA AATGCTCGGC
CCGGTCCGGC TGCTGCCGGC GGTGATATTC TATTCGCTCT ACGTCGTCGG CATCATGGTT
TTCGTCAACG GGTCGGCGAC GGCGACCTTT CGGTCCGCGC TGCTGCTCGG GGCGCTGTTC
GGACTGTTCT GCTATTCGAC CTTCGAGCTC ACGGCGCTTT CGGTGTTGAA GCATTGGACC
TGGCCGATGG TCATCGCCGA CATCTCGTGG GGGACCTTCG TCACGGCGAT ATCCGGCTCG
CTGGGCTTGT TGATCGCCGA TCGGCTGTCG CCGCGCTGA
|
|---|
| Protein sequence | MKRYGVLYLA TFIVLIPLDF LFLGFIAKDF FASQVGEMLG PVRLLPAVIF YSLYVVGIMV
FVNGSATATF RSALLLGALF GLFCYSTFEL TALSVLKHWT WPMVIADISW GTFVTAISGS
LGLLIADRLS PR
|
|---|
| |