| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3087 |
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| Symbol | |
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| ID | 4023591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3431386 |
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| End bp | 3433929 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963287 |
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| Product | ATP-binding region, ATPase-like |
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| Protein accession | YP_570214 |
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| Protein GI | 91977555 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.373882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0754896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCAG CCGTACAGGC GCACGACTGG GCGTCGACTC CGCTGGGTCC CTCCGATCAT
TGGCCGGCGC CGCTGCGCGT GACCGTGGCG ACGATGCTCG CGACAGCGGT CCCGTCCTTC
ATCGTTTGGG GGCCGGAGCA GACGTTGATC TACAACGACG GCTATATCGA ATTGCTGGCG
AAGCGGCATC CCGCCGCGCT AGGGCGTTCG TTCCGCGACG TGTGGCCGGA AATCTGGTCC
GACCTCGAGC CGCTGGTGCG TCGCGCCTAT GACGGCGAAG CGCTGTCGCA GCAGAACCTG
CCTTTGCTGA TGGAGCGCAG AGGTTACGTC GAGGAGACCT GGTTCACGTA TTTCTATACG
CCGATCAGTC TCGACGACGG CAGCATCGGC GGTTTTCTCT GCGGCTGCAT CGAGAACACC
GAGCCGATGC GCTCCGGCAA GGCGCTCGAG GAAGCCAACG CCAAACTGCA ACAGGCAATC
ACCGAACAGC GCGCTGCGCA CGATGCCGTC GGACGCAGCG AGGCGCGCTA TCGCGCGCTG
TTCGAGGCGA TCGACGACGG GTTCTGCATC ATCGAGTTCT TCGACGGGCC GCACGGTCCG
TTGAGCGACT ACGTCCATGT CGAAGCCAAT GCCGGCTACG AGCGGCAGAC CGGCATCCCC
GATATCGTCG GCAGAACCGT CCGCGATCTG GTCCCGGACG AAGCGGATGG ATGGGTCGAA
CTGTATCGCG ACGTTCTCTT TACCGGGCGG GCCATCCATT TCGAGCGTGA CTTCGTCGCG
GTGAACCGCA TCATCGAGGT GTCGGCCTCG CGGATCGAGC CGGAGAGCCG CCGGCAGGTC
TCGGTGCTGT TCCGGGATAT CACCGCGCGA AAGCAGTCCG AGGCGGCGCT CCGCGCCAGC
GAAACGCTCG CCCGGGAAAA CGTGCAGCGC GTCAAGCTCG CGCTGGCGGC CGGTGCGATC
ATCGGCACAT GGCTTTGGGA TCTGCCCAAC GACCGCTTCA CGGTCGACGA GGCCTTCGCC
CGCGCGTTCG GGCTGGACCC CGCCAAGGGC CGCGAAGGCC TCAGCCTTGC GCAAATCGTC
GAGACCGTTC ACCCGGACGA TCAGGCGGGC TTGGCCGCGG CGATCAACGA GGCCGTCAAG
CGGGGCGGCT CCTACGCGCA TCAGTATCGG GTGCGGCGTG CTGACGGGAA ATACTATTGG
CTGGAGGCCA ATGGACGTGT CGACCACGGG CCGGACGGCA AGCCGTTGAG TTTCCCGGGC
GTGCTGATCG ACGTCGAGGA CCGCCGCGCT TTGGTGGACG AGCGCGACCG CGCGATCTCG
GCGCTGCGTT CGCTCAACGA AACCCTGGAG CAGCGCATTG CCGAAAGCCG GGCCGAACTG
CTGCGGTCCG AGGAGCAGTT GCGGCAATCG CAGAAGATGG AAGCGGTCGG TCAGTTGACC
GGCGGCCTCG CGCACGACTT CAACAACCTG CTGGCCGGCA TCTCGGGCAG TCTCGAACTG
ATGACCACAC GGATCAGCCA GGGTCGGCTC AAGGATGTCG ACAAATATCT GGTGGCCGCG
CAAGGGGCTG TGAAGCGCGC CGCTTCTCTC ACGCATCGCC TGCTGGCATT CGCGCGCCGC
CAGACCCTCA CGCCGACGGC GGCGAACGTC AACAAGCTCG TCAGCGGCAT GCTGGACCTG
ATCCAGCGCA CGGTCGGGCC CGGCATCGAG GTTCAGCACG TCGGCGCCAC CGGCCTGTGG
GCCGTGCTGG TGGACGTGCC GCAGCTCGAG AGCGCATTGC TCAATCTGTG CATCAACGCG
CGCGACGCCA TGCCCAGCGG CGGCAAGATC ACGATCGAGA CCGGCAATCG CTGGATCGAT
CGCGTCCAGT CCAGAATCTA CGACATTCCG ACCGGGCAAT ACGTGTCGCT GTGCGTCTCC
GACACCGGCA CCGGCATGAC GCGCGACGTG ATCGCCAAGG CGTTCGACCC GTTCTTCACC
ACCAAGCCGA TCGGCCAGGG TACGGGGCTC GGCCTGTCGA TGATCTACGG CTTCGCCCAG
CAGTCCGGCG GGCAGGTGCG GATCTATTCC GAAGTCGGCG AAGGCGCGAT GGTCTGCATC
TATCTTCCGC GCCATCGCGG CAACGCGGCG GAGGATGAGC GCAGCCCGGA CTCGACTGTC
ATTCCGTTCG CTGAGGCGGG CGAGACCGTG CTTGTCGTCG ACGACGAGCC GACGGTGCGG
ATGCTGGTCG CCGACGTGCT GGAAGATCTC GGCTACACCG CGCTCGAGGC GGCCGACAGC
GTCGGCGGCT TGAGGATCCT GCAATCGGAG GCGCGGATCG ACCTGCTGGT GACGGATGTC
GGCCTGCCGG GCGGGATGAA CGGGCGGCAA TTGGCCGACG CGGCGCGCGA GAGCCGGCCC
AATCTCAATG TCCTGTTCAT CACCGGCTTC GCCGAAAACG CGCTGCTCAA CAACGGCCAG
CTCGAGCCGG GCATGGCGGT TCTCACCAAG CCGTTCGCGG TCGACACGCT GGCCGCGCGC
ATCCGCGAGC TGATCGCCAA GTAA
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| Protein sequence | MRAAVQAHDW ASTPLGPSDH WPAPLRVTVA TMLATAVPSF IVWGPEQTLI YNDGYIELLA
KRHPAALGRS FRDVWPEIWS DLEPLVRRAY DGEALSQQNL PLLMERRGYV EETWFTYFYT
PISLDDGSIG GFLCGCIENT EPMRSGKALE EANAKLQQAI TEQRAAHDAV GRSEARYRAL
FEAIDDGFCI IEFFDGPHGP LSDYVHVEAN AGYERQTGIP DIVGRTVRDL VPDEADGWVE
LYRDVLFTGR AIHFERDFVA VNRIIEVSAS RIEPESRRQV SVLFRDITAR KQSEAALRAS
ETLARENVQR VKLALAAGAI IGTWLWDLPN DRFTVDEAFA RAFGLDPAKG REGLSLAQIV
ETVHPDDQAG LAAAINEAVK RGGSYAHQYR VRRADGKYYW LEANGRVDHG PDGKPLSFPG
VLIDVEDRRA LVDERDRAIS ALRSLNETLE QRIAESRAEL LRSEEQLRQS QKMEAVGQLT
GGLAHDFNNL LAGISGSLEL MTTRISQGRL KDVDKYLVAA QGAVKRAASL THRLLAFARR
QTLTPTAANV NKLVSGMLDL IQRTVGPGIE VQHVGATGLW AVLVDVPQLE SALLNLCINA
RDAMPSGGKI TIETGNRWID RVQSRIYDIP TGQYVSLCVS DTGTGMTRDV IAKAFDPFFT
TKPIGQGTGL GLSMIYGFAQ QSGGQVRIYS EVGEGAMVCI YLPRHRGNAA EDERSPDSTV
IPFAEAGETV LVVDDEPTVR MLVADVLEDL GYTALEAADS VGGLRILQSE ARIDLLVTDV
GLPGGMNGRQ LADAARESRP NLNVLFITGF AENALLNNGQ LEPGMAVLTK PFAVDTLAAR
IRELIAK
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