Gene RPD_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3078 
Symbol 
ID4023581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3426110 
End bp3426352 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content66% 
IMG OID637963277 
Productprevent-host-death protein 
Protein accessionYP_570205 
Protein GI91977546 
COG category 
COG ID 
TIGRFAM ID[TIGR01552] prevent-host-death family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.018345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.547068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAGA TTCAGCTTCG GGATGCGAAA TCCGGCCTAT CGGCACTGGT AGACGATGCC 
GTCAGCGGCG AGCCGGCCAT CATCACCCGG CATGGCAAAC GCGAGGCCGT GCTTCTGAGC
TATCGGGAAT GGGAGCGGCT TTCGCAGATC CCCTCGTTCG GCCGCCTGCT GATGGCCGCG
CCACTCGCGC CGGAGGACCT GCCGCCACGC GATGCCGCGC CGCCGCGCCA AACCGAGTTT
TGA
 
Protein sequence
MREIQLRDAK SGLSALVDDA VSGEPAIITR HGKREAVLLS YREWERLSQI PSFGRLLMAA 
PLAPEDLPPR DAAPPRQTEF