Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3072 |
Symbol | |
ID | 4023575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3419990 |
End bp | 3420784 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637963271 |
Product | hypothetical protein |
Protein accession | YP_570199 |
Protein GI | 91977540 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.195617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCTTCG TGCTCTCCAA GATTCTCGGC TTCTTCCTCC ATCCTTCCAA CACGATCGCG ATGATCTGTT TGGCGGGCGT GGTGCTGCTG CTGACGCGAT GGCGGCGCGC CGGTGCGCGG GTGCTGGGCG TCGGCGTCGT GCTGCTGCTC GTGGCCGGTT ACTCGCCGCT CGGCAGCGTG CTGTTGCTCA CGCTGTCGGA GCGCTTCCCG CCGTGGCAGT TCAACGGCCG CGCGCCGGAC GGGATCATCG TGCTCGGCGG CGCGGTCGAC TCCGAGGTCA GCGCCGCGCG GAGTTCGCTG GAGATCGATT CGTCCGCCGA GCGCGTCGTC GCCGCGCTCG AGCTGGCGCG GCAATATCCG CAGGCGCGGA TCATCTACAG CGGCGGCAGC GGCAATCTGA TCGCGAATTC GGTGGCCGAA GCGCCGATCG CAGGCGAGCT GCTTGCCCGT TTCGGCGTTG CGCCGGATCG CGTCGTGCTC GAAAGCAAGT CACGCACGAC CGCGGAAAAT GCGAGCTTCA CGCGCGAACT GGTGTCGCCG AAGCCCGGCG AGGTTTGGTT GCTGGTGACC TCGGCGTTTC ATATGCCGCG GTCGATCGAA GCCTTCCGCG CTGTGGAGTT CGATGTTCAG GCCTATCCGG TGGATTGGCG GACGCGCGGC TGGCGTGATG CGGCGCTGCC GTTCGACCGG CTGAGCAGCG GCCTCGCGCG CATGGACGTC GCGGTCCACG AATGGGCCGG CCTGCTGGCC TATCGGCTCG GCGGGAAGGG CGCGGCGCCG CGACCGTCGC CGTAG
|
Protein sequence | MFFVLSKILG FFLHPSNTIA MICLAGVVLL LTRWRRAGAR VLGVGVVLLL VAGYSPLGSV LLLTLSERFP PWQFNGRAPD GIIVLGGAVD SEVSAARSSL EIDSSAERVV AALELARQYP QARIIYSGGS GNLIANSVAE APIAGELLAR FGVAPDRVVL ESKSRTTAEN ASFTRELVSP KPGEVWLLVT SAFHMPRSIE AFRAVEFDVQ AYPVDWRTRG WRDAALPFDR LSSGLARMDV AVHEWAGLLA YRLGGKGAAP RPSP
|
| |