Gene RPD_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3056 
Symbol 
ID4023559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3403204 
End bp3403533 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content57% 
IMG OID637963255 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_570183 
Protein GI91977524 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.889585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCG AGGGCGGCCG TGCGGGGACC GGCAATCCGG CGACCTCGGT TATCACCAAG 
GTCAAGCCGA AGACGAAACG GCCGAATCTG TATCGCGTTC TGATTCTGAA CGACGACTAC
ACGCCGATGG AGTTCGTCGT TCACGTCCTG GAGAAGTTTT TCCAGATGGA TGTTGAGGCG
GCGACCCAGG TGATGTTGCA TGTTCATCAT CACGGCATCG GGGAGTGCGG CGTTTTCACC
TATGAGATCG CCGAGACCAA GGTGACGCAG GTGATGGACT TCGCGCGCAA GCACCAGCAT
CCTCTGCAAT GCGTGATGGA AAAGAAGTAA
 
Protein sequence
MAGEGGRAGT GNPATSVITK VKPKTKRPNL YRVLILNDDY TPMEFVVHVL EKFFQMDVEA 
ATQVMLHVHH HGIGECGVFT YEIAETKVTQ VMDFARKHQH PLQCVMEKK