| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3055 |
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| Symbol | |
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| ID | 4023558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3400601 |
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| End bp | 3403006 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963254 |
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| Product | ATPase AAA-2 |
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| Protein accession | YP_570182 |
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| Protein GI | 91977523 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.800011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACAT TTTCCCAGAG TCTTGAGCAA TCCCTCCACC GCGCGCTCGC GATCGCCAAC
GAGCGACACC ATCAATACGC GACGCTCGAG CATCTGTTGC TCTCGCTGGT CGACGATTCC
GACGCCGCCG CGGTGATGCG GGCTTGCAGC GTCGACCTCG ATAAGCTCCG CGCCAGCCTC
GTCAACTATC TCGAGACCGA ATTCGAGAAC CTCATCACCG ATGGGTCGGA AGACGCCAAG
CCGACCGCCG GGTTCCAGCG TGTGATCCAG CGCGCGGTAA TTCATGTGCA GTCGTCCGGC
CGCGAAGAGG TGACCGGCGC CAACGTGCTG ATCGCGATCT TCGCCGAACG CGAGAGCCAT
GCCGCGTATT TCCTGCAGGA GCAGGACATG ACGCGCTACG ACGCGGTCAA CTACATCAGC
CATGGCATCG CCAAGCGGCC CGGCGTGTCC GAGGCGCGGC CGGTGCGCGG CGTCGACGAA
GAGACCGAGA CCAAGAGCGG CGAGGACTCC AAGAAGAAGG GAGACGCGCT CGAGACCTAT
TGCGTCAACC TGAACAAGAA GGCGCGCGAC GGCAAGATCG ATCCGGTGAT CGGCCGCAAT
GCCGAGATCA ACCGCGCGAT TCAGGTGCTG TGCCGCCGGC AGAAGAACAA CCCGCTGTTC
GTCGGCGAAG CCGGCGTCGG CAAGACCGCG ATCGCCGAGG GCCTCGCCAA GCGTATCGTC
GACAGCGAAG TGCCGGAAGT GCTCGCGGCG GCGACGGTGT TCTCGCTCGA CATGGGCACG
CTGCTCGCCG GCACGCGCTA TCGCGGCGAC TTCGAGGAGC GCCTGAAGCA GGTGCTCAAG
GAGCTCGAAG CGCATCCCAA CGCGATTCTG TTCATCGACG AGATCCACAC CGTGATCGGC
GCTGGCGCGA CCTCCGGCGG CGCGATGGAT GCCTCGAATT TGCTCAAGCC TGCCTTGGCT
TCGGGCACGA TCCGCTGCAT GGGCTCGACG ACCTATAAGG AATACCGTCA GCACTTCGAG
AAGGATCGCG CGCTTGTGCG CCGGTTCCAG AAGATCGACG TCAACGAGCC GACGGTGGCG
GATGCGATCG CGATCCTGAA GGGGCTGAAG CCCTATTTCG AGGACTATCA CAAGCTCAAA
TACACCAACG AGGCGATCGA ATCCGCGGTC GAGCTTTCGT CGCGCTACAT CCATGACCGG
AAATTGCCGG ACAAGGCGAT CGACGTGATC GATGAATCCG GCGCGGCGCA GATGCTGGTG
GCGGAGAACA AGCGCAAGAA GACGATCGGC ATCAAGGAAA TCGAGGCCAC CGTCGCGACC
ATGGCTCGGA TCCCGCCGAA GAGCGTGTCG AAGGACGACG CCGAGGTGCT GATGCATCTC
GAGCAGACCC TGAAGCGCGT CGTGTTCGGG CAGGACAAGG CGATCGAATC GCTCGCCGCG
TCGATCAAGC TCGCCCGCGC CGGCCTGCGG GAACCGGAGA AGCCGATCGG CTGCTATCTG
TTCTCGGGTC CGACCGGCGT CGGCAAGACC GAAGTCGCCA AGCAATTGGC GCTGACGCTC
GGCGTCGAGC TGCTGCGCTT CGACATGTCG GAATACATGG AACGCCACAC CGTCTCGCGG
CTGATCGGCG CGCCGCCCGG CTATGTCGGC TTCGATCAGG GCGGCCTTTT GACCGACGGC
GTCGACCAGC ATCCGCATTG CGTCGTGCTG CTCGACGAAA TCGAGAAGGC CCATCCCGAT
CTGTACAACG TGCTGCTGCA GATCATGGAT CACGGCCGGC TGACCGATCA CAACGGCAAG
CAGGTCAACT TCCGCAACGT CATCCTGATC ATGACGACGA ACGCGGGCGC GGCCGATCTG
GCCCGGCAGG CGTTCGGCTT CACCCGCAAC AAGCGGGAAG GCGACGACCA CGAGGCGATC
AACCGGCAGT TCGCTCCGGA ATTCCGCAAC CGGCTCGACG CGATCGTGTC GTTCGCGCAT
CTCAATGCCG ATGTCATCGG CATGGTGGTC GAGAAGTTCG TGCTGCAGCT CGAGGCTCAG
CTCGCCGATC GCGACGTGAC GATTGAGCTG TCCGACGCCG CCAAGGCGTG GCTGGTTCAG
CACGGCTATG ACGAGCAGAT GGGGGCGCGG CCGATGGCGC GCGTGATCCA GGAGCACATC
AAGAAACCGC TCGCCGACGA GGTGCTGTTC GGTCAGCTCA AGGGCGGCGG CCATGTCCGG
GTCGTTTTGG TCAAGGACGA GGCGGTCGCC GGCGTCGAGC TGGAGAAGAT CGCCTTCGAG
TTCCTCGATG GCCCGGTGAC GCCCAAGCCG GAGAAGCTGC CCAACGCCAA AAAGCGCGGC
GGCGCAGCGC GGAAACCGAA GTCAGGCCCG AAGGGGTCGG CAAAGGATCC GCTGGTCAAG
GCCTGA
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| Protein sequence | MPTFSQSLEQ SLHRALAIAN ERHHQYATLE HLLLSLVDDS DAAAVMRACS VDLDKLRASL
VNYLETEFEN LITDGSEDAK PTAGFQRVIQ RAVIHVQSSG REEVTGANVL IAIFAERESH
AAYFLQEQDM TRYDAVNYIS HGIAKRPGVS EARPVRGVDE ETETKSGEDS KKKGDALETY
CVNLNKKARD GKIDPVIGRN AEINRAIQVL CRRQKNNPLF VGEAGVGKTA IAEGLAKRIV
DSEVPEVLAA ATVFSLDMGT LLAGTRYRGD FEERLKQVLK ELEAHPNAIL FIDEIHTVIG
AGATSGGAMD ASNLLKPALA SGTIRCMGST TYKEYRQHFE KDRALVRRFQ KIDVNEPTVA
DAIAILKGLK PYFEDYHKLK YTNEAIESAV ELSSRYIHDR KLPDKAIDVI DESGAAQMLV
AENKRKKTIG IKEIEATVAT MARIPPKSVS KDDAEVLMHL EQTLKRVVFG QDKAIESLAA
SIKLARAGLR EPEKPIGCYL FSGPTGVGKT EVAKQLALTL GVELLRFDMS EYMERHTVSR
LIGAPPGYVG FDQGGLLTDG VDQHPHCVVL LDEIEKAHPD LYNVLLQIMD HGRLTDHNGK
QVNFRNVILI MTTNAGAADL ARQAFGFTRN KREGDDHEAI NRQFAPEFRN RLDAIVSFAH
LNADVIGMVV EKFVLQLEAQ LADRDVTIEL SDAAKAWLVQ HGYDEQMGAR PMARVIQEHI
KKPLADEVLF GQLKGGGHVR VVLVKDEAVA GVELEKIAFE FLDGPVTPKP EKLPNAKKRG
GAARKPKSGP KGSAKDPLVK A
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