Gene RPD_3047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3047 
Symbol 
ID4023550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3393710 
End bp3394171 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID637963246 
Producthypothetical protein 
Protein accessionYP_570174 
Protein GI91977515 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.429967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCGATGACAT CCGCGAAGGT GAAGTCACCG TCACGCCGCC GCCGCCGACC 
GATGCGGGAC TGGTCTTCAT CGGCCGGGTC CGGACGCCCT GGACCTCGCG TGGCGAGACG
CCGCGGCAGG GTAGTCTCGA CGGCCCGGTG TGCCGGCTGG AGATTTTCGA GCCTTGGACG
CAGGCGCTGC TCGGGCTCGA AAAATTCACC CAGCTTCAAG TGGTGTACTG GCTGCATCAG
GCGCGGCGCG ATCTGGTGAT CCAGCGCGGC CACGGCCACG ACGGACCGCG CGGCACCTTT
GCGTTGCGCT CGCCGCTGCG GCCGAATCCG ATCGGCATCT CGGCAGCCGC TCTGGTCGGG
ATCGAGGGAT CGACGGTGCT TGTCCGGGGG CTGGATTGCC TCGACCAAAC CCCGCTGATC
GATCTCAAAC CGGACCGTTG TGTACATTCG ATGGTGAAGT AG
 
Protein sequence
MTATDDIREG EVTVTPPPPT DAGLVFIGRV RTPWTSRGET PRQGSLDGPV CRLEIFEPWT 
QALLGLEKFT QLQVVYWLHQ ARRDLVIQRG HGHDGPRGTF ALRSPLRPNP IGISAAALVG
IEGSTVLVRG LDCLDQTPLI DLKPDRCVHS MVK