| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3019 |
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| Symbol | |
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| ID | 4023522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3362909 |
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| End bp | 3363985 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963218 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_570146 |
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| Protein GI | 91977487 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.978745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCCAG ACCGCAGACT GCTCGACCTC TTCAAAATTG GCATTCCGAT CGTGCAGGCG
CCGATGGTGG GCGTGCAGGA CGCCGACATC ATGATCGGCG CGGCCCGCGC CGGTGCGCTG
CCGTCGCTCG CCTGCGCCTC GCTGTCGCCG GAGAAAGCCC GCGCGCAGGT CGGCATCGTC
CGGCAGGCGG TATCGACGCC GATCAATCTG AATTTCTTCT GCCACCACGC GGTCGATGCC
GATCCGCAGC GTGAGGCTGG ATGGAAGCAA CGGTTGGGCG AGTACTACAA GGAATATCAC
GTCGACCCCG ACAAGCCGCT CGCGTTCGCC AACCGCGCAC CATTCGACGA AGCGATGTGC
GAACTCGTCG AAGAGTTGAA GCCGGAGGTT GTGAGCTTCC ATTTCGGACT GCCGGCGCCG
GCGTTGCTGG CGCGGGTCAA GGCGGCTGGC TGCATCGTGA TCGCGTCGGC CACGATCGTG
CGCGAAGCAA TCTGGCTCGA GGAGCGTGGC GTCGATGCGG TGATCGCGCA GGGCGCCGAG
GCCGGCGGCC ATCGCGGCAT GTTCCTGACC GACAGGATCG CCGAACAGCC CGGTCTGTTC
GCGCTGCTTC CGCAGGTGGT GGACGCGGTG CGGGTGCCTG TGATTGCGGC CGGCGGCATC
GCGGACGGAC GCGGCATTGC GGCGGCCTTC GCGCTGGGTG CGGCCGGCGT GCAGATCGGG
ACTGCCTATC TGCGTTGTCC GGAATCCAAG GTCAGCGCAC CGGGGCGCGT CGCTCTGGCG
CGCGCCGGAG ACGATTCCAC CGTGATCACC AATGTGATGA CTGGTCGACC GGCGCGCGGC
GTGGTCAACC GCGTCATGCG CGAGGTCGGG CCGATCGCGC CGGAAGCGCC GCCGTTTCCG
TATGCTGCGA CCGCTCTGGC GCCGCTGAAG GCTGCCGCCG AGGCGCAGGG CCGGGTCGAT
TTCACCATGC TGTGGGCCGG GCAGGCGGTC GGGCTCGGCC GCGACATGTC GGCTGCTGAT
ATGACGCGGG CGCTGGCCGG GGCGGCGCTG GCCCGGCTGA GCCAGCTCGC TCGCTGA
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| Protein sequence | MWPDRRLLDL FKIGIPIVQA PMVGVQDADI MIGAARAGAL PSLACASLSP EKARAQVGIV
RQAVSTPINL NFFCHHAVDA DPQREAGWKQ RLGEYYKEYH VDPDKPLAFA NRAPFDEAMC
ELVEELKPEV VSFHFGLPAP ALLARVKAAG CIVIASATIV REAIWLEERG VDAVIAQGAE
AGGHRGMFLT DRIAEQPGLF ALLPQVVDAV RVPVIAAGGI ADGRGIAAAF ALGAAGVQIG
TAYLRCPESK VSAPGRVALA RAGDDSTVIT NVMTGRPARG VVNRVMREVG PIAPEAPPFP
YAATALAPLK AAAEAQGRVD FTMLWAGQAV GLGRDMSAAD MTRALAGAAL ARLSQLAR
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