Gene RPD_3018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3018 
SymbolgatC 
ID4023521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3362534 
End bp3362821 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content64% 
IMG OID637963217 
Productaspartyl/glutamyl-tRNA amidotransferase subunit C 
Protein accessionYP_570145 
Protein GI91977486 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.830164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTTG ATGCCGCCAC CGTCCGCCGC ATCGCGCATC TGGCGCGGAT CGCGGTGACC 
GACGACGAGG TCCCGCATCT GCAGGGCGAG TTGAACGCGA TGCTGGCGTT CGTGGAGCAG
CTCGCGGAAG TCGATGTCGA CGGCGTCGAG CCGATGACCT CGGTGACCCC GATGCAGATG
AAGAAGCGCG CCGATGGGGT CAATGACGGT GAGATCGCCG ACCATGTTGT CGCGAACGCG
CCGGCCACTG AAGATCACTT TTTCCTGGTG CCGAAGGTGG TCGAGTAG
 
Protein sequence
MSVDAATVRR IAHLARIAVT DDEVPHLQGE LNAMLAFVEQ LAEVDVDGVE PMTSVTPMQM 
KKRADGVNDG EIADHVVANA PATEDHFFLV PKVVE