Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3018 |
Symbol | gatC |
ID | 4023521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3362534 |
End bp | 3362821 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637963217 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit C |
Protein accession | YP_570145 |
Protein GI | 91977486 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.830164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGTTG ATGCCGCCAC CGTCCGCCGC ATCGCGCATC TGGCGCGGAT CGCGGTGACC GACGACGAGG TCCCGCATCT GCAGGGCGAG TTGAACGCGA TGCTGGCGTT CGTGGAGCAG CTCGCGGAAG TCGATGTCGA CGGCGTCGAG CCGATGACCT CGGTGACCCC GATGCAGATG AAGAAGCGCG CCGATGGGGT CAATGACGGT GAGATCGCCG ACCATGTTGT CGCGAACGCG CCGGCCACTG AAGATCACTT TTTCCTGGTG CCGAAGGTGG TCGAGTAG
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Protein sequence | MSVDAATVRR IAHLARIAVT DDEVPHLQGE LNAMLAFVEQ LAEVDVDGVE PMTSVTPMQM KKRADGVNDG EIADHVVANA PATEDHFFLV PKVVE
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