| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3016 |
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| Symbol | gatA |
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| ID | 4023519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3360632 |
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| End bp | 3362110 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963215 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_570143 |
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| Protein GI | 91977484 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.918656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACC TGACATCGCT GACGCTTGCC GAGGCCCGCG ACGGCCTCGC GCGCAAGTCC
TTCACCGCTC TCGAACTGAC CGAGGCGCAT CTCACTGCGA TCGAGGCCGC GCGTGGGCTC
AACGCCTTTG TGCTGGAGAC CCCGGAGCAG GCGCGGAAGA TGGCGCAGGC GGCCGATGCG
CAGATCGCGA CGGGAGACGG CGGACCGCTC GCCGGCATCC CGCTCGGCAT CAAGGACCTG
TTCGCGACCA AAGACACGCG CACCACCGCC TGTTCGAAAA TTCTCGGTGA TTTCCATCCG
CCCTACGAGT CCACCGTCAC CACTCAGCTA TGGCGCGATG GTGCGGTGAT GGTCGGCAAG
CTGAACAACG ACGAGTTCGC GATGGGCTCG TCGAACGAGA CGTCGTGCTT CGGGCCGGTG
GTCAATCCGT GGCGCCGCGC GGGCTCGGAG ACGAAGCTAG TGCCCGGCGG TTCGTCTGGC
GGTTCCGCCG CTGCGGTCGC AGCAGGGCTC TGCCTCGGCG CCACCGCGAC CGACACCGGC
GGGTCGATCC GGCAACCGGC GGCGTTCACC GGCACCGTGG GCATCAAGCC GACCTATGGC
CGCTGCTCGC GCTGGGGCAT CGTCGCGTTC GCATCCTCGC TCGATCAGGC CGGCCCGATC
GCCCGCACGG TGCGGGACTC GGCGATCCTG CTCCGCTCGA TGGCCGGCCA CGATCCGAAG
GACACTACCT CGGTCGACCG CCCGGTGCCG AACTACGAGA CCGCGATCGG GGCCTCGGTG
AAGGGTATGA AGATCGGCAT TCCGAAGGAG TATCGGCTCG AAGGCATGCC GCCCGAGATT
GAACGACTGT GGACGCAGGG CGCCGAGTGG CTGAAGGCTT CCGGCGCCGA GCTGGTCGAG
GTATCGCTGC CGCACACCAA ATACGCACTG CCGGCCTATT ACATCGTGGC GCCCGCCGAA
GCGTCCTCGA ACCTCGCGCG CTATGACGGC GTGCGCTATG GCGCGCGCGT CAATGGCCGC
AACATCGTCG AGATGTATGA GAACACCCGC GCCGCAGGCT TCGGCGCCGA AGTCAAACGC
CGCATCATGA TCGGAACCTA CGTGCTGTCG GCCGGCTATT ACGACGCGTA TTATCTGCGC
GCGCAGAAGG TCCGCACCTT GATCAAGCGC GATTTCGAGC AATGCTTCGA TCAGGGCGTG
TCGGCGATCC TGACCCCGGC GACGCCGTCG GCTGCGTTCG GCATCGGCGA GAAGGGCGGA
GCGGATCCGG TCGAGATGTA TCTGAACGAC ATTTTCACCG TGACGGTGAA CATGGCGGGC
CTTCCGGGCA TCGCGGTTCC GGCCGGCGCC GATGGGCAGG GCTTGCCGCT CGGGCTGCAA
CTGATCGGGC GGCCGTTCGA CGAGGAGACC CTGTTCTCGC TCGGTGAGGT GATCGAGCAG
GCGGCGGGGC GGTTCACGCC CAAAAAGTGG TGGGCCTAG
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| Protein sequence | MTDLTSLTLA EARDGLARKS FTALELTEAH LTAIEAARGL NAFVLETPEQ ARKMAQAADA
QIATGDGGPL AGIPLGIKDL FATKDTRTTA CSKILGDFHP PYESTVTTQL WRDGAVMVGK
LNNDEFAMGS SNETSCFGPV VNPWRRAGSE TKLVPGGSSG GSAAAVAAGL CLGATATDTG
GSIRQPAAFT GTVGIKPTYG RCSRWGIVAF ASSLDQAGPI ARTVRDSAIL LRSMAGHDPK
DTTSVDRPVP NYETAIGASV KGMKIGIPKE YRLEGMPPEI ERLWTQGAEW LKASGAELVE
VSLPHTKYAL PAYYIVAPAE ASSNLARYDG VRYGARVNGR NIVEMYENTR AAGFGAEVKR
RIMIGTYVLS AGYYDAYYLR AQKVRTLIKR DFEQCFDQGV SAILTPATPS AAFGIGEKGG
ADPVEMYLND IFTVTVNMAG LPGIAVPAGA DGQGLPLGLQ LIGRPFDEET LFSLGEVIEQ
AAGRFTPKKW WA
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