| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3014 |
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| Symbol | gatB |
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| ID | 4023517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3357832 |
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| End bp | 3359316 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637963213 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_570141 |
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| Protein GI | 91977482 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC CCGTCAAACC GTCCCAGCTC ATCAAGGGCG CTACCGGCGA TTGGGAAGTC
GTGATCGGGC TGGAGATCCA CGCCCAGGTC TCGTCCAACG CCAAGCTGTT CTCGGGTGCT
GCGACCGCTT TCGGCGGCGA TCCCAACAGC CATGTCTCGC TAGTCGACGC TGCAATGCCG
GGAATGCTGC CGGTGATCAA CGAAGAATGC GTCAAGCAGG CGATCCGGTC AGGGCTGGGA
CTGAACGCGC AGATCAATCT GCGCTCGGTG TTCGACCGCA AGAACTATTT CTATCCGGAC
CTGCCGCAGG GCTACCAGAT CAGCCAGTAC AAATCGCCGA TCGTCGGCGA GGGAATTGTC
GTGGTCGACC TGCCGAACGG CGACAGCATC ACCGTCGGCA TCGAGCGGCT GCATCTCGAG
CAGGACGCTG GCAAGTTGCT GCACGACCAG CACCCGACCA TGACATTTGT CGACCTCAAC
CGCTCCGGCG TCGCGCTGAT GGAGATCGTC TCCAAGCCGG ACCTGCGTTC ATCCGAACAG
GCCAAGGCCT ACGTCTCCAA GCTCCGCACC ATCCTGCGCT ATCTCGGAAC CTGCGACGGC
GACATGGAGA AGGGCAGCCT TCGCGCCGAC GTCAACGTTT CGGTGCGGAA GCCGGGCGAG
CCGTACGGCA CGCGCTGCGA GATCAAGAAC GTCAATTCGA TCCGCTTCAT CGGACAGGCG
ATCGAATACG AAGCGCGCCG CCAGATCGGC ATCCTCGAAG ATGGCGGTTC GATCGACCAG
GAGACCCGCC TCTACGATCC CGACAAGGCC GAGACGCGGT CGATGCGCTC CAAGGAAGAG
GCACACGACT ATCGCTACTT CCCCGATCCC GATCTTTTGC CGTTGGAGTT TTCCCAGGCC
TATGTCGACG AGCTGAAGAC CGGGTTGCCG GAACTGCCGG ACCAGAAGAA GTCCCGATTC
ATTGGGACTT TCGGACTTTC GTCCGACGAC GCTGGCGTGC TGGTGAGCGA GCGCGAGAGC
GCCGATTTCT ACGAGGCCGT GCTGGCCAAG CTGTCGGACG CTGCGCGCGA CGGCAAGCTC
GCGGCCAACT GGGTCATCAA TGAATTGTTC GGCCGCCTCA ACAAGGACGG CCAGAACATC
GACACGTCCC CAGTGTCGGC CGCGCAACTC GCGGCGATCG TCGATCTGAT CGGCGAGGGC
ACCATCTCCG GCAAGATTGC CAAGGAACTT TTCGAAATCG TTTGGCGTGA GGGCGGCGAT
CCGCGCGAGC TGGTCGAAGC GCGCGGCATG AAGCAGGTCA CCGATCTCAC CGCGATCGAG
AAAGTGGTCG ACGACATCGT TGCAAGCAAT CCTGACAAGG TCGCGCAGGC GATCGCCAAG
CCGGCGATGC TCGGATGGTT CGTCGGGCAG GTGATGAAAT CGTCGGGCGG CAAGGCGAAC
CCGCAGGCGG TCAACGATCT CTTGAAGCGC AAACTCGGGC TCTGA
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| Protein sequence | MNAPVKPSQL IKGATGDWEV VIGLEIHAQV SSNAKLFSGA ATAFGGDPNS HVSLVDAAMP
GMLPVINEEC VKQAIRSGLG LNAQINLRSV FDRKNYFYPD LPQGYQISQY KSPIVGEGIV
VVDLPNGDSI TVGIERLHLE QDAGKLLHDQ HPTMTFVDLN RSGVALMEIV SKPDLRSSEQ
AKAYVSKLRT ILRYLGTCDG DMEKGSLRAD VNVSVRKPGE PYGTRCEIKN VNSIRFIGQA
IEYEARRQIG ILEDGGSIDQ ETRLYDPDKA ETRSMRSKEE AHDYRYFPDP DLLPLEFSQA
YVDELKTGLP ELPDQKKSRF IGTFGLSSDD AGVLVSERES ADFYEAVLAK LSDAARDGKL
AANWVINELF GRLNKDGQNI DTSPVSAAQL AAIVDLIGEG TISGKIAKEL FEIVWREGGD
PRELVEARGM KQVTDLTAIE KVVDDIVASN PDKVAQAIAK PAMLGWFVGQ VMKSSGGKAN
PQAVNDLLKR KLGL
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