| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2994 |
|---|
| Symbol | |
|---|
| ID | 4023497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3334063 |
|---|
| End bp | 3335274 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637963193 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_570121 |
|---|
| Protein GI | 91977462 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.658439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.272776 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCA GAGAACTCCC AAGGCTGACC ACCGCCGTTG CGTGGAGCTT CGTCGCGGTA
GCTGCGCTGG GCTATCTGTA CGATCTGCTG CGGCAGACGC GCGATCATCT GACCAACGGG
GCGGGCCGTC CGTTCGGCGA CGACTTCATC AATTACTGGT CGGGCGCGTA TCTCGCCTGG
CACGGCCGTG TGAACGAGAT TTACGATACC CACGCATTCC ATATTTTCGA ACAATCCGTG
GTGGGGGCGA CCCTCGACAA CTATCACTAC AGCTATCCAC CGGTCCTGCT GCTCCTCACG
GCGCCTCTGG CGTTCATTCC CTATGTACCG GCGCTGCTGA CCTGGCTGGT GGCGGGCTGG
TACGCGTTCT ATCGCGCGTT GCGTCTGGCG ATGCCGGGGC GCAGCGCGCT GCTCCTCGCG
CTGTCCGCTC CAGCGGTTTT CATCAACGCG GTCGGCGGAC AAAACGGCAC GTGGACAGCG
GCGTTGCTGG GCGGCGGTCT GGGTTTGCTG GAGCGAAGGC CGCTGCTCGC CGGCGGATTG
CTCGGACTGC TGATCTACAA GCCGCAGCTC GGGCTACTGA TTCCGGTTGC GCTGTTGGCG
GGGCGGCATT GGCGCGCCTT CGCATCGGCA AGCCTTGTTG CCGGCGGGCT CCTCGCCGTC
AGCGCAATCG GCTACGGGAC GGATGTGTGG GCGCAATATC TACACAATCT CGGCTTGCTG
CGGCAGATCA TTCTGGAAGA CGGCAGTGGG GTTTGGCATC GATTTGTTTC GGTGTTCGTC
GCCGCGCGGC GGCTCGGCGC ACCAGTCGAG GCCGCTTATG CGGTCCAGAT CGCGACGGGC
GCACTCGCCT GCATCGCCGT CGCGTGGGTC TGGTTCGGAC GTGCGTCGGC CGGCGTCAAG
AATGCTGTGC TTGTGCTCGG CACCTGCTTC GCGACGCCGT ACCTGCAGGA CTATGATCTG
GTGTTCGGCG CGTTGGCCGT GGCGTGGCTC TGGCACGGCG GCGCTTCCCC GGTGTCCGAC
CGGGCGCTGC AAGTTTCTGC GGGTCTCTTG TTGCTGCTTC CGCTGGTCGC CGCGTCGCTG
GCGCATCTGA CCGGGCTTGC GCTCGGCCCG GTTTTCATTC TGCCGCTGTT CCTAGTCGCG
CTGCGGATGA GCTTCTGGGT CGGAGCCGCG AATGCGCGCG CATCGGAAGG GGTTGCAGGC
TCTGCTCGAT AA
|
|---|
| Protein sequence | MQRRELPRLT TAVAWSFVAV AALGYLYDLL RQTRDHLTNG AGRPFGDDFI NYWSGAYLAW
HGRVNEIYDT HAFHIFEQSV VGATLDNYHY SYPPVLLLLT APLAFIPYVP ALLTWLVAGW
YAFYRALRLA MPGRSALLLA LSAPAVFINA VGGQNGTWTA ALLGGGLGLL ERRPLLAGGL
LGLLIYKPQL GLLIPVALLA GRHWRAFASA SLVAGGLLAV SAIGYGTDVW AQYLHNLGLL
RQIILEDGSG VWHRFVSVFV AARRLGAPVE AAYAVQIATG ALACIAVAWV WFGRASAGVK
NAVLVLGTCF ATPYLQDYDL VFGALAVAWL WHGGASPVSD RALQVSAGLL LLLPLVAASL
AHLTGLALGP VFILPLFLVA LRMSFWVGAA NARASEGVAG SAR
|
|---|
| |