| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2988 |
|---|
| Symbol | rplI |
|---|
| ID | 4023491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3328125 |
|---|
| End bp | 3328709 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637963187 |
|---|
| Product | 50S ribosomal protein L9 |
|---|
| Protein accession | YP_570115 |
|---|
| Protein GI | 91977456 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0359] Ribosomal protein L9 |
|---|
| TIGRFAM ID | [TIGR00158] ribosomal protein L9 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.396245 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTCA TTCTGCTGGA ACGCGTCGCC AAGCTCGGCC AGATGGGCGA ACTGGTTCGC
GTCAAGGACG GTTTCGCCCG CAACTTCCTG CTGCCGCGCG GCAAGGCGCT GCGTGCGACC
GCGGCGAATC GCGACAAGTA CGAGCACATG AAGGCCGACC TCGAGGCGCG CAACATCGAG
GCCAAGGCTG AGGCTGCCAA GGTGGCCGAG AAGATCGACG GCAAGAACGT GATCGTGATC
CGGCAGGCGT CGGAGACCGG CCAGCTGTTC GGCTCGGTGT CGGTGCGCGA CATCGTCACG
AGCTTCGAAG CCGACGGCGT CAAGATCACC CGCAGCCAGA TCCTGCTCGA TGCGCCGATC
AAGACCATCG GCAGGCACAC CATCGAAGTC GCGGTGCATC CGGAAGTCGA GGTCGGCGTC
TCGGTGACGG TGGCGCGCAG CGTCGAGGAA GCCGAGCGCA TCAATCGCGG CGAGGACATC
TCGAGCCGTC GTGAAGATCA GGACGCCGCC GCCGAGGCGA TCGCCGCCGC AGGCGAGTTC
TTCGATCCGG ACGCGCAGCA GGACGAAGAG CCGGAGCAGC AGTAA
|
|---|
| Protein sequence | MEVILLERVA KLGQMGELVR VKDGFARNFL LPRGKALRAT AANRDKYEHM KADLEARNIE
AKAEAAKVAE KIDGKNVIVI RQASETGQLF GSVSVRDIVT SFEADGVKIT RSQILLDAPI
KTIGRHTIEV AVHPEVEVGV SVTVARSVEE AERINRGEDI SSRREDQDAA AEAIAAAGEF
FDPDAQQDEE PEQQ
|
|---|
| |