| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2979 |
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| Symbol | |
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| ID | 4023482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3318794 |
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| End bp | 3319531 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963178 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_570106 |
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| Protein GI | 91977447 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.107733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATT TGACGGGACG AACCGCGCTG GTGACCGGAG CGACCGGCGG CATCGGCGGC
GCGATCGCGC AGGCGCTGCA CGGCCAGGGC GCGACTGTGG CGATTTCCGG CACCCGGCGC
GAGGCGCTCG ACACGCTGGC GGCCAAGCTC GGCGATCGCG TTCACGTGTT GCCGTGCAAC
CTGTCGGATG CGTCCGAGGT GGAGGCGCTG GTGCCGGCTG CGGCCGAGGC GATGGGCCAG
CTGGACATTC TGGTCTGCAA CGCCGGCATC ACCCGCGACA ATCTCTTCGT GCAATTGCGC
GACGAAGACT GGGATGAGGT GATCAAGGTC AATCTCACCG CGACCTTCCG CCTGACCCGC
GCCGCGACCA AGCTGATGAT GCGCAAGAAG TTCGGCCGAA TCATCGCGAT CACCTCGGTG
GTCGGCGTCA CCGGCAATCC GGGGCAGGGC AACTACACGG CCTCGAAGGC CGGACTGATC
GGGATGATCA AGACGCTCGG CGCCGAATAC GCCAAGCGCA ATGTGACGGC TAATTGCATC
GCGCCGGGCT TCATCGCGAC GCCGATGACC GACGTGCTCA ACGACAAGCA GCGCGAAGCG
ATTCTCGGCA AGGTGCCCGC CGGCCGGCTC GGCACTCCGG AGGATATCGC TGCGGCGGCG
GTCTATCTCA GTTCGAACGA GGCCGCGTAC GTCACCGGTC AGACCATCCA CGTCAACGGC
GGGATGGCCA TGATCTGA
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| Protein sequence | MFDLTGRTAL VTGATGGIGG AIAQALHGQG ATVAISGTRR EALDTLAAKL GDRVHVLPCN
LSDASEVEAL VPAAAEAMGQ LDILVCNAGI TRDNLFVQLR DEDWDEVIKV NLTATFRLTR
AATKLMMRKK FGRIIAITSV VGVTGNPGQG NYTASKAGLI GMIKTLGAEY AKRNVTANCI
APGFIATPMT DVLNDKQREA ILGKVPAGRL GTPEDIAAAA VYLSSNEAAY VTGQTIHVNG
GMAMI
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