| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2977 |
|---|
| Symbol | |
|---|
| ID | 4023480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3316893 |
|---|
| End bp | 3318158 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637963176 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
|---|
| Protein accession | YP_570104 |
|---|
| Protein GI | 91977445 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.270914 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.12233 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGTG TCGTCGTCAC AGGCCTTGGC ATGGTTTCGC CACTCGGCTG TGGCGTCGAC
GCGACCTGGA GCCGGGTGCT TAACGGGGAG AGCGGCGCAC GTCGGATCGA GACGTTCGAC
GTCTCCGATC TGACCAGCCA GATCGCCTGC ATTATCCCGC GCGGCGATGG TACCAACGGT
ACTTTTAATC CCGATCAATG GATGGAGCCG AAGGACCAGC GCAAGGTCGA CGACTTCATC
GTCTACGCCA TGGCTGCTGC GCGGCAGGCG CTCGATGACG CTGGATGGCA TCCGTCTACG
GAAGACGAGC GTTGCGGCAC CGGCGTGCTG ATCGGTTCCG GTATCGGCGG CCTCGAAGGA
ATCGCCGAGA CTGCGCTGCT GTTGAAAGAG CGCGGACCGC GCAAGATCTC CCCATTCTTC
ATTCCAGGAC GCCTCATCAA TCTGGCGTCG GGCTATGTGT CGATCGAGTT CGGACTCAAA
GGGCCGAACC ATGCTGTGGT CACCGCGTGT TCGACCGGGG CGCATGCGAT CGGCGACGCT
TCACGGCTGA TCGCGCTCGG CGACGCCGAC GTGATGGTGG CCGGCGGCAC CGAATCCCCG
ATCAGCCGCT TGGCGATGGC CGGCTTCTGC GCCGCCCGCG CGCTCTCAAC CGGCTTCAAC
GACGCGCCGC AAAAAGCGTC GCGTCCGTAC GACAAGGATC GCGACGGCTT CGTCATGGGC
GAGGGCGCCG GCGTCGTCGT GCTGGAGGAA TACGAGCACG CGAAAGCGCG CGGCGCGCGG
ATCTACGCCG AAGTCATCGG TTACGGCCTG TCCGGCGACG CCTATCACAT CACGGCGCCA
ACCCCGGATG GCGATGGCGC TTTCCGCTGC ATGACGGCGG CGATCAAGCG TGCTGGCATC
TCCGTTTCGG ACATCGACTA CATCAACGCG CACGGCACCT CGACGCCGCT CGGCGACGAG
ATCGAACTCG GCGCCGCACA GCGGCTGCTC GGCAACGCGG CGTCGCGGGT CTCGATGTCG
TCGACCAAAT CCTCGATCGG GCACCTGCTC GGTGCGGCCG GTGCAGTCGA AGCGATCTTC
TGCACGCTGG CGATTCGCGA TAACGTTGCG CCTCCCACCA TCAATCTCGA CAACCCGTCG
GTTGAAACAG CGATCGATCT CGTGCCGTGG AAGTCGCGTG CGCGTGAAAT CAATGTCGTG
CTGTCGAACT CTTTCGGCTT TGGCGGCACT AACGCATCGT TGATCCTGCA ACGCGTCGCG
AATTGA
|
|---|
| Protein sequence | MRRVVVTGLG MVSPLGCGVD ATWSRVLNGE SGARRIETFD VSDLTSQIAC IIPRGDGTNG
TFNPDQWMEP KDQRKVDDFI VYAMAAARQA LDDAGWHPST EDERCGTGVL IGSGIGGLEG
IAETALLLKE RGPRKISPFF IPGRLINLAS GYVSIEFGLK GPNHAVVTAC STGAHAIGDA
SRLIALGDAD VMVAGGTESP ISRLAMAGFC AARALSTGFN DAPQKASRPY DKDRDGFVMG
EGAGVVVLEE YEHAKARGAR IYAEVIGYGL SGDAYHITAP TPDGDGAFRC MTAAIKRAGI
SVSDIDYINA HGTSTPLGDE IELGAAQRLL GNAASRVSMS STKSSIGHLL GAAGAVEAIF
CTLAIRDNVA PPTINLDNPS VETAIDLVPW KSRAREINVV LSNSFGFGGT NASLILQRVA
N
|
|---|
| |