| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2970 |
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| Symbol | pdxA |
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| ID | 4023473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3309468 |
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| End bp | 3310472 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963169 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_570097 |
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| Protein GI | 91977438 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.60024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.331525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAC CTCTGGCTGT GACGCTGGGC GAGCCCGCAG GAATTGGCCC CGACATCACA
ATTGCGATGT GGCTACGCAG GGGAGAATTG CGACTGCCGC CCTTCTATCT GCTTGGCGAC
CGTGACTGCA TTGCGCGCCG CGCCTGTGCG CTCGGCGTCG ACCTTCCGAT CGCTGACGTC
GGCGTCGAGG AAGCGATCAG CGCCTTTCCC AATGCCCTGC CCGTGGTCGC CACGGGAAAC
CTCGCCACCG CCGACCCGGG CAAGCCGGAC GCCACCAGCG CCGCCGCCGC GGTCGGCGCG
ATCCGCCAGG CCGTCAGTGA TGTCGGCACC GGCCGAGCCT CCGCCGTGGT CACCAATCCG
ATCGCCAAGA GCGTGCTGTA TCAGGCCGGC TTCGCGCACC CCGGACACAC CGAATTCCTC
GCCGAGCTGG CTCGCGGCGA TGGCGCCGCG CCGCAGCCGG TGATGATGCT GTGGTGCCCG
AGCCTCGCGG TGGTGCCGGT CACGATCCAT GTTTCGTTGC GCGACGCGAT CGCGACGCTC
ACGACCGAGC TGATCGTGTC GACTGCGCGT ATCGTGGTGA AGGATTTGCA GAGCCGCCTC
GGCGTCGTCG CACCGCGGCT CGCGATCGCG GGACTCAATC CACATGCCGG CGAAGACGGC
TCGCTCGGGA CCGAAGATCG CGCCGTCGTC GCGCCCGCGG TGGAGATCCT CCGCCGAGAC
GGAATCGACG CCCGCGGCCC ACTGCCCGCC GACACCATGT TTCATGCCGC CGCACGGAAA
ACCTACGATT GCGCAATCTG CATGTATCAC GATCAGGCGC TGATCCCGAT CAAGACCATC
GCCTTTGACG AAGGCGTCAA CGTCACGCTG GGCCTGCCCT TTGTCCGCAC CTCGCCCGAT
CACGGCACCG CCTTCGATAT CGCCGGCACC GGGCGCGCCG ATCCGTCGAG CCTGATCGCT
GCGTTGCGGC TCGCGGCGCG CATGACCGCT GCGCAACCCG CATGA
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| Protein sequence | MIKPLAVTLG EPAGIGPDIT IAMWLRRGEL RLPPFYLLGD RDCIARRACA LGVDLPIADV
GVEEAISAFP NALPVVATGN LATADPGKPD ATSAAAAVGA IRQAVSDVGT GRASAVVTNP
IAKSVLYQAG FAHPGHTEFL AELARGDGAA PQPVMMLWCP SLAVVPVTIH VSLRDAIATL
TTELIVSTAR IVVKDLQSRL GVVAPRLAIA GLNPHAGEDG SLGTEDRAVV APAVEILRRD
GIDARGPLPA DTMFHAAARK TYDCAICMYH DQALIPIKTI AFDEGVNVTL GLPFVRTSPD
HGTAFDIAGT GRADPSSLIA ALRLAARMTA AQPA
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