| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2947 |
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| Symbol | aspS |
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| ID | 4023450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3282675 |
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| End bp | 3284447 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963147 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_570075 |
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| Protein GI | 91977416 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGTT ACCGAACCCA TACTTGCGGC GCGCTCCGCG ACAGCGATAT CGATCAGACC
GTCCGCCTGT CCGGCTGGTG CCATCGCATC CGCGACCATG GCGGCTTGCT GTTCATCGAC
CTGCGCGACC ATTACGGCCT GACCCAGTGC GTCGCCGATC CCGACTCGCC GGCGTTCAAG
GACGCCGAGA AGCTGCGCGC CGAATGGGTG GTGCGGATCG ACGGACGCGT GCGACGCCGC
CCCGAAGGCA CCGACAATGA CGATTTGCCG ACCGGCAAGA TCGAATTGTT CATCACCGAG
ATCGAAGTGT TGGGTCCGGC CGGCGAGCTG CCGCTGCCGG TGTTCGGCGA GCAGGAATAT
CCCGAGGATG TCCGGCTGCG CTATCGCTTC CTCGACCTGC GCCGCGAGAA GCTGCACCAG
AACATCATGA CCCGCGGCGC GATCGTCGAC GCGATGCGCG CGCGGATGAA GCAACAGGGC
TTCTTCGAAT TCCAGACGCC GATCCTGACC GCATCGTCGC CCGAAGGCGC GCGCGACTTC
CTGGTGCCGA GCCGGATTCA TCCAGGCAAG TTCTACGCGC TGCCGCAGGC GCCGCAGCAG
TACAAGCAAC TGCTGATGAT GTCGGGCTTC GACCGCTACT TCCAGATCGC ACCGTGCTTC
CGCGACGAGG ACCCGCGCGC CGACCGGCTG CCCGGCGAGT TCTATCAGCT CGACGTCGAG
ATGAGCTTCG TCACGCAAGA CGATGTTTTT GCTGCGATGG AGCCGGTGAT CACCGGCGTG
TTCGAAGATT TTGCCAAAGG CAAGCGCGTC ACCAAGGGGT GGCCGCGGAT TCCTTATGCC
GACAGCATGC GCAAATACGG CACCGACAAG CCGGACCTGC GCAATCCGAT CGAGATGCAG
GATGTCTCCG AGCACTTCCG CGGCTCCGGC TTCAAGGTGT TCGCGCGGAT GCTCGAAGAA
GAGCGTAATC AGGTCTGGGC GATCCCGGGA CCGGGCGGCG GCAGCCGCGC GTTCTGCGAC
CGGATGAACT CCTGGGCGCA AGGCGAAGGC CAGCCCGGCC TCGGCTACAT CATGTGGCGA
GAAGGCGGCG AGGGTGCTGG TCCCTTGGCC AACAACATCG GCCCCGAGCG CACCGAAGCG
ATCCGCGCCG CGCTCGGCCT GAAGGCGGGC GACGCCGCGT TTTTCGTCGC GGGCGATCCG
TCGAAATTCG TGAAGTTCGC CGGGCTCGCC CGCACCAAGG TCGGCGAGGA GCTCAACCTG
ATCGACAAGG ATCAGTTCGC GCTCGCCTGG GTGGTCGACT TCCCGATGTA CGAGTACAAC
GAGGACGACA AGAAGGTCGA CTTCTCGCAC AACCCGTTCT CGATGCCGCA GGGCGGTATG
GATGCGTTGC TCGGTCAGGA TCCGCTGACG ATCAAGGCGT TCCAGTACGA CATCACCTGC
AACGGCTTCG AGATCGCCTC CGGTGGCATC CGCAATCATC GCCCCGAAGC GATGGTGAAG
GCGTTCGAGA TCGCGGGTTA TGGCGAGCAG GAAGTGGTCG ATCGCTTCGG CGGCATGTAC
CGCGCCTTCC AATACGGCGC GCCGCCGCAT GGCGGCATGG CCGCCGGCGT CGACCGCATC
GTCATGCTGC TGTGCGGCAC CAACAATCTG CGTGAGATCT CGCTGTTCCC GATGAACCAG
CGAGCCGAAG ACCTGCTGAT GGGAGCGCCG TCACAGGTGA CGCCCAAGCA GTTGCGCGAG
CTGCATATCC GTCTCAATCT GCCAGAAAAC TGA
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| Protein sequence | MHRYRTHTCG ALRDSDIDQT VRLSGWCHRI RDHGGLLFID LRDHYGLTQC VADPDSPAFK
DAEKLRAEWV VRIDGRVRRR PEGTDNDDLP TGKIELFITE IEVLGPAGEL PLPVFGEQEY
PEDVRLRYRF LDLRREKLHQ NIMTRGAIVD AMRARMKQQG FFEFQTPILT ASSPEGARDF
LVPSRIHPGK FYALPQAPQQ YKQLLMMSGF DRYFQIAPCF RDEDPRADRL PGEFYQLDVE
MSFVTQDDVF AAMEPVITGV FEDFAKGKRV TKGWPRIPYA DSMRKYGTDK PDLRNPIEMQ
DVSEHFRGSG FKVFARMLEE ERNQVWAIPG PGGGSRAFCD RMNSWAQGEG QPGLGYIMWR
EGGEGAGPLA NNIGPERTEA IRAALGLKAG DAAFFVAGDP SKFVKFAGLA RTKVGEELNL
IDKDQFALAW VVDFPMYEYN EDDKKVDFSH NPFSMPQGGM DALLGQDPLT IKAFQYDITC
NGFEIASGGI RNHRPEAMVK AFEIAGYGEQ EVVDRFGGMY RAFQYGAPPH GGMAAGVDRI
VMLLCGTNNL REISLFPMNQ RAEDLLMGAP SQVTPKQLRE LHIRLNLPEN
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