| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2943 |
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| Symbol | |
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| ID | 4023446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3278169 |
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| End bp | 3279110 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963143 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_570071 |
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| Protein GI | 91977412 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.519142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATCG CGACGGGTCT CCTGGTTGCA GGTGCGGTTT CTCTGAGCGC GCTCGGTGCG
GCATGGTCCC AGGCGGCGCC GAAAACCAAT GGCGCCACCG CTCAGCCGGC TCCCCCGCAG
GCTGCTCCAG CTCCGGCGCC TGCTCCCGCT AAACAGGCTT GCGCCAATCC CGACGCGCTG
GGCGTCGGCC GCGTCGTCGA GATCGACACC ACTGGCGGTC CGGGATTCGG CTTCGAACAC
TTCAAGCAGC TCGATTTCCT GCGCGACAAG GAAGTCGTGC TCACCTTCGA CGATGGCCCT
TGGCCGAGCA ACACGCCGGC GGTGGTGAAG GCGCTGGCCG ACCAATGCAC CAAGGCGATC
TTTTTCCCGA TCGGCAAACA CGCCACCTAT CACCCGGAGA TCCTCAAGCA GGTTGCGGCG
GCCGGCCACA CCATCGGCTC GCACACCTGG TCCCATGCCA ATCTCAGCAA CAAGAAGCTG
ACCGAGCAAC AGGCCAAGGA CGAGATCGAA AAGGGATTCG CTGCAGTGAA ATGGGCGATC
GGCACCGCGC CCTCGCCATT CTTCCGCTTC CCGGCGCTGC AGCACCCCCC GGCGCTGGTG
ACATACCTCG GCACTCGCAA CGTCGCGATG TTCTCCTGCG ATCTGGACTC GTTCGACTTC
AAGGCCCGGA AGCCCGAGCA GGTGATCGAC ACCGTGATGA AGAAGGTCGA CAAACTCGGC
AAGGGCATCA TCCTGATGCA CGACTTCCAG AAGAGCACGG CGGAGGCGTT GCCCGAACTG
CTGCGGCGGC TGAAGGCCGG CGGCTACAAG GTCGTGCAGA TGAAGGCCAA GGCGCCCGTC
CAGACGCTGC CGCAATACGA CGAGGAACTC GTCAAGAGCG CCGCGCTGCC GACCGTCAGC
GCGCGCCCGG TCAGTTCCGT GGTGCAGACG ATCTCCGAGT GA
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| Protein sequence | MRIATGLLVA GAVSLSALGA AWSQAAPKTN GATAQPAPPQ AAPAPAPAPA KQACANPDAL
GVGRVVEIDT TGGPGFGFEH FKQLDFLRDK EVVLTFDDGP WPSNTPAVVK ALADQCTKAI
FFPIGKHATY HPEILKQVAA AGHTIGSHTW SHANLSNKKL TEQQAKDEIE KGFAAVKWAI
GTAPSPFFRF PALQHPPALV TYLGTRNVAM FSCDLDSFDF KARKPEQVID TVMKKVDKLG
KGIILMHDFQ KSTAEALPEL LRRLKAGGYK VVQMKAKAPV QTLPQYDEEL VKSAALPTVS
ARPVSSVVQT ISE
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